Pectobacterium parmentieri WPP163: Pecwa_4234
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Entry
Pecwa_4234 CDS
T01106
Name
(GenBank) fatty oxidation complex, alpha subunit FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pwa
Pectobacterium parmentieri WPP163
Pathway
pwa00071
Fatty acid degradation
pwa00280
Valine, leucine and isoleucine degradation
pwa00310
Lysine degradation
pwa00362
Benzoate degradation
pwa00380
Tryptophan metabolism
pwa00410
beta-Alanine metabolism
pwa00640
Propanoate metabolism
pwa00650
Butanoate metabolism
pwa00907
Pinene, camphor and geraniol degradation
pwa00930
Caprolactam degradation
pwa01100
Metabolic pathways
pwa01110
Biosynthesis of secondary metabolites
pwa01120
Microbial metabolism in diverse environments
pwa01200
Carbon metabolism
pwa01212
Fatty acid metabolism
Module
pwa_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Pecwa_4234
00650 Butanoate metabolism
Pecwa_4234
09103 Lipid metabolism
00071 Fatty acid degradation
Pecwa_4234
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Pecwa_4234
00310 Lysine degradation
Pecwa_4234
00380 Tryptophan metabolism
Pecwa_4234
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Pecwa_4234
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Pecwa_4234
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Pecwa_4234
00930 Caprolactam degradation
Pecwa_4234
Enzymes [BR:
pwa01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Pecwa_4234
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Pecwa_4234
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Pecwa_4234
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
Pecwa_4234
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DUF6471
Motif
Other DBs
NCBI-ProteinID:
ACX89958
LinkDB
All DBs
Position
4677648..4679837
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AA seq
729 aa
AA seq
DB search
MLYQGESLYLNWLEDGIAELVFSAQGSVNTLDTRTVASLGKALDVLAEQPNLKGLLLRSD
KPAFIVGADITEFLSLFAAPAEKLHEWLAFANRIFNRLEDLSVPTLSAINSYALGGGCEC
VLATDFRLATPDARIGLPETKLGIMPGFGGTVRLPRLLGADSALEIIAAGKDVSAVDALK
VGLVQAVVANEKLIPAAIKMLKQAINGELDWQAYRRPKLEALKLSKIEAMMSFTTAKAMV
LQTAGKHYPAPMLAVKTIEAAATMTRDDALQLETQHFVQLARSNEARALVGIFLNDQYVK
GKAKKLIGETSVPQQAAVLGAGIMGGGIAYQSAFKGVPIRMKDISEKPLALGMNEAAKLL
NKQMERGKLDGMKMAAILASIQPTLDYAGFERTDIVVEAVVENPKIKASVLAETESHISE
STILASNTSTIPITTLAASLERPQNFCGMHFFNPVHRMPLVEIIRGPKTSDSTIASVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAAFSLLLRDGADFRDIDNVMEKKFGWPMGPAYL
LDVVGIDTAHHAQTVMAEGFPQRMAKDYRDAIDVLFEHQRFGQKNGQGFYRYQTDGKGKQ
RKERDDAVDTLLKDISQPKKTFSAEEIIARMMIPMINEVARCLEEDIVASPAEADMALVY
GLGFPPFHGGACRYLDTLGSERYVEMAQSLAHLGTIYQVPDGLQQKARSNEGYYPSVAPH
ADISHGQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctttatcaaggtgaatccctctaccttaactggcttgaggacggcattgccgagctg
gtattttctgcccagggctccgtaaacacactagatacacgcacggttgccagcctaggt
aaagcgctcgacgttctggcggaacagccgaacctgaagggcttactgctgcgttcggat
aaacctgcatttattgtcggggccgatatcacggaattcctttctctttttgccgcacca
gccgaaaaactgcatgagtggctggccttcgccaaccgtattttcaaccgccttgaggat
ttatccgttcccacactgtccgcgattaatagctatgcgttgggtggcggctgtgaatgc
gtgctggcgaccgattttcgcttagccacaccggatgcacgtatcggcttgcccgaaact
aaactcgggatcatgccgggttttggtggcacggtcaggctaccacgtctgctgggtgct
gatagcgcgctggagattatcgccgcaggtaaagacgtcagcgcggtcgatgctttaaaa
gtggggctggtgcaggccgttgtcgcgaatgaaaaactgattcccgccgctatcaaaatg
ctaaaacaggctataaatggcgaattagactggcaggcttatcggcgcccaaaacttgag
gcgctgaagctcagtaaaattgaagctatgatgagctttaccaccgccaaagcgatggtg
ctgcaaaccgccgggaaacattatccggcaccgatgttagcggtaaaaaccatcgaagcc
gccgcaaccatgacgcgagatgacgccttgcagctcgaaacgcagcacttcgttcaactg
gctcgctcaaatgaagcccgcgccctcgtcggtattttcctcaacgatcaatatgttaaa
ggcaaagcgaagaagctgatcggcgagacatctgtgccacagcaggccgccgtactaggt
gcaggaattatgggcggcggaattgcctatcagtccgcgttcaaaggcgtgccgattcgg
atgaaagacatcagcgagaaaccgctcgcactggggatgaatgaagcagccaaactcctg
aataagcagatggaacgaggcaagctggacggaatgaaaatggcggcgattctggccagt
attcagccaacgctggattacgccgggttcgagcgtaccgatatcgtggttgaagccgtg
gtagaaaacccgaaaatcaaagccagcgtattagcagaaaccgaatcgcacattagcgaa
agtacgattctggcttcgaatacctcaacgattcccattactacactggctgcttcgtta
gaacgaccacaaaatttctgcggtatgcacttcttcaacccagtacaccgcatgccgctg
gttgaaatcattcgcggccccaaaaccagtgacagcaccatcgccagcgtggtggcttac
gccagcaaaatgggcaagacaccgattgtcgtgaacgactgccccggattcttcgtgaat
cgcgtcctatttccctactttgcggcattcagcttattgctcagagacggtgccgatttc
cgcgatatcgataatgtcatggagaaaaaattcggttggccgatgggccctgcttatctg
cttgacgttgtcggtattgataccgctcaccatgctcagaccgtgatggctgagggcttc
ccacagcgcatggcgaaagactatcgcgatgcgattgatgtgctgtttgaacaccaacgt
ttcgggcagaagaatggtcaaggcttctaccgttatcaaacggatggcaaggggaaacag
cgtaaagagcgagatgacgccgtagatacgctccttaaagacatcagccaaccgaaaaaa
actttcagtgcagaagagattatcgctcgcatgatgatcccgatgattaatgaagtcgcg
cgttgcctggaagaagacatcgttgccagtccggccgaagcagacatggcgctggtatac
gggctaggttttcctcccttccacggcggagcctgccgttatctggataccttgggcagc
gaacgttatgtcgaaatggcgcagtcgttggcacacctcggcaccatctatcaggtgcca
gacggcttacagcaaaaagccagaagcaatgaaggctattacccatcggtcgcgccacac
gcggacatttcccacggacaaccggcatga
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