Pectobacterium parmentieri WPP163: Pecwa_4517
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Entry
Pecwa_4517 CDS
T01106
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pwa
Pectobacterium parmentieri WPP163
Pathway
pwa03030
DNA replication
pwa03410
Base excision repair
pwa03420
Nucleotide excision repair
pwa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pecwa_4517
03410 Base excision repair
Pecwa_4517
03420 Nucleotide excision repair
Pecwa_4517
03440 Homologous recombination
Pecwa_4517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pwa03032
]
Pecwa_4517
03400 DNA repair and recombination proteins [BR:
pwa03400
]
Pecwa_4517
Enzymes [BR:
pwa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pecwa_4517
DNA replication proteins [BR:
pwa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Pecwa_4517
DNA repair and recombination proteins [BR:
pwa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Pecwa_4517
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pecwa_4517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Prok-E2_E
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ACX90207
LinkDB
All DBs
Position
complement(4952735..4955524)
Genome browser
AA seq
929 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEATGAMYGVLNMLRSLLQQYSPSHVAV
VFDAKGKTFRDELFENYKAHRPPMPEDLREQIEPLHNMVKAMGLPLLAVSGVEADDVIGT
LAVQAEKAGKSVLISTGDKDMAQLVTPSVTLINTMNNTILGPQEVCDKYGIPPELIIDFL
ALMGDASDNIPGVPGVGEKTAQALLQGLGGLDSLYANLDKIAGLSFRGAKTMAPKLEQHK
EVAYLSYQLATIKTDVELELSCDQLTVNELDVDELHRLFSRYEFKRWLSDIESGTWMQGK
KSSQPVQTVSNAVVEQAVEEDNVPTLSADGYVTILDEKTLLDWVERLKLADVFAFDTETD
GLDTLTANLIGLSFAIKPGEAAYLPLAHDYLDAPDQLDRATVLALLKPLLEDEKLLKIGQ
NLKFDKGVMQRYDIDLRGIAFDTMLESYVLDSVAGRHDMDSLAERYLKHKTITFEEIAGK
GKNQLTFNQIALEQAGPYAAEDADVTLHLHQTLWGKLQPHADLCQVFQTIDMPLVPVLSR
IERTGVLIDPAILAEHSKELTTRLAELEIQAYELAGEEFNLSSTKQLQGILYEKQKLPIL
KKTPKGAPSTNEEVLAELALDYPLPKLILEYRGLAKLKSTYTDKLPLMINPATKRVHTSY
HQAVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIAPKGYSIVAADYSQIELRIMAHLSG
DEGLLNAFANGLDIHRATASEVFGIALDKVTSEQRRSAKAINFGLIYGMSAFGLSRQLNI
PRSESQKYMNLYFERYPGVQDYMERTRQQAAEHGYVSTLDGRRLYLPDIHSRNAMARKGA
ERAAINAPMQGTAADIIKKAMIAIDDWLQKDAPKVKMIMQVHDELVFEIDDSIVEESISK
IKVLMEGCMQLNVPLQVDIGTGMNWDQAH
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggctcagattgcagaaaatcccttaatactggtagacggttcatcttatttgtatcgt
gcctatcacgcttttccaccgttaacaaacagcgcgggggaagccaccggtgcaatgtat
ggcgtattgaatatgctacgcagtttgttgcagcaatatagccccagccatgttgccgtt
gtttttgatgcaaaagggaaaacgtttcgcgacgagttgtttgaaaactataaagctcac
cgcccacctatgccggaggatctacgcgaacagatcgagcctctgcataatatggtgaaa
gcgatggggttaccgcttctggcggtttctggcgtagaagcggacgatgtgattggtaca
ctcgcagtgcaggcggaaaaagccggtaagtcggtgctgattagcaccggcgataaagat
atggcacaactggtgacgccgagcgtaacgctcattaataccatgaacaacaccattctt
ggcccacaggaagtgtgtgataaatacggtattcctccagagctgattatcgatttcctc
gcgctgatgggggatgcatcggataacattcctggtgtgcctggcgttggggagaaaacc
gcccaggcgctactgcaagggctcggcgggctggattcgctgtatgcaaatctcgataaa
attgctgggctttccttccgtggtgcgaaaaccatggcgccgaagctggaacaacataaa
gaagtggcctacctctcttatcagcttgccactattaaaacggatgttgagcttgaactc
agttgcgatcagctcactgttaacgagctggatgtggatgaactgcatcgcctcttttcc
cgttatgaatttaaacgctggttatcagatattgaatcaggcacctggatgcagggtaaa
aagagcagccagcctgttcagactgtgagtaatgcggtggttgagcaggcggttgaagaa
gataacgtacctacgctgtctgccgatggttatgtcacgatccttgatgaaaaaacgctg
ttggattgggttgagcgtttaaaactggctgatgttttcgcttttgatacggaaactgat
gggctggatactctcactgccaatctgattggtttgtcatttgcgattaagccaggcgaa
gcggcttatttaccgttggcacatgattatctggatgcgccggatcaattggatcgtgcc
acggtattggccttgttaaaaccgctgctggaagatgagaagctgcttaagattggtcag
aatctcaaatttgataaaggcgtgatgcagcggtatgacatcgatttacgcggcatcgcg
tttgataccatgctggaatcttacgtgctcgacagcgtggcgggtcgtcacgatatggac
agcttggccgagcgctatctgaaacacaaaaccattacctttgaagagatcgcgggtaaa
ggaaaaaatcaactgacgttcaatcagattgcattggaacaggctgggccgtatgcggcc
gaggatgcggacgttacgctgcatctgcatcagacactgtgggggaaactccagccgcat
gccgatctgtgtcaggtcttccaaaccatcgatatgccgctggttcctgttttatcccgc
atcgagcgtactggcgtgctgatcgatcctgcaattctggcggaacactcaaaagagcta
acaacccgtctggcggaattggaaatacaagcctatgagttggcgggcgaagagttcaat
ctctcatcgaccaagcagctacagggaattctgtatgaaaaacaaaagctgccgattctg
aagaaaacgccaaaaggtgcaccgtcaaccaatgaggaagtgctggctgaactggcgctg
gattaccctctgccgaagctaatccttgaataccgagggttggccaagctgaaatcgact
tacaccgataagttgccgctgatgatcaatccggcgacgaagcgcgtgcatacctcttat
catcaggctgttactgcaactggacgtttgtcttccagcgatcctaacctgcaaaacatc
ccggtgcgtaacgatgagggacgccgtattcgtcaggcattcattgcgcctaaaggttat
agcattgttgcggctgactactcgcaaatcgaactgcgtattatggcgcatctatcgggt
gatgaagggttgttgaatgcgttcgcaaacgggctggatatccaccgggcaacggcgtca
gaagtgtttggcatcgcgttggataaggtgacatcagaacagcgtcgtagtgcgaaagcg
atcaacttcggtctgatctacggcatgagcgcgtttggtttgtcgcgtcagttgaacatc
ccccgtagcgaatcgcagaaatacatgaacctgtattttgagcgttatcctggtgtgcag
gattacatggagcggacgcgccaacaggccgcggagcatggctatgtgtctacattggat
ggtcgccgtctctatttaccagatatccactcgcgtaatgctatggcgcgtaaaggcgcg
gaacgtgcggcgattaatgccccgatgcagggcaccgctgccgatattattaagaaagcg
atgatcgcgattgacgattggctacagaaagacgcgccaaaggtgaagatgatcatgcag
gttcacgatgagttggttttcgagattgatgattcgattgttgaagaatctattagtaaa
atcaaagtattaatggaaggttgtatgcaattgaatgttccgttgcaggtagacatcggt
acaggtatgaactgggatcaagcccattaa
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