Pectobacterium parmentieri WPP163: Pecwa_4562
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Entry
Pecwa_4562 CDS
T01106
Name
(GenBank) exopolygalacturonate lyase
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
pwa
Pectobacterium parmentieri WPP163
Pathway
pwa00040
Pentose and glucuronate interconversions
pwa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Pecwa_4562
Enzymes [BR:
pwa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
Pecwa_4562
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pel9A-like_beta_helix
Motif
Other DBs
NCBI-ProteinID:
ACX90250
LinkDB
All DBs
Position
complement(5004461..5006695)
Genome browser
AA seq
744 aa
AA seq
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MKRCSSQKCDFVRKHRSSRLAAVALTNALLFSFSAHAATESTPVWHGIAFGQSTDVNFSS
NVLPEKIGVNDVTINGKKLAPGDNVDLSAPITIESRGGKIANTHDGLTFFYTQLPANVNF
TLQSDITVEQFGPENGAKPAAQEGAGILVRDIIGIPRQEPLKEGYEEFPAASNMVMNAIM
TQDKKSHTEIKLQAILRNGVTQPWGNAGAKITKTSYQENVNLEQTPTFRLKLERTNDGFI
TSYAPKGTDNWVSKEVKGADVVTKLDKDHYYVGFFASRNAKITVSNAQLTTTPAQTKASP
EFKVKAYDPLLQVMSSPKTTSEHYVVQAKANYNGTIAVSQDGKSLGDAKQVKAGETFSLP
AKIAGNSAEFKIAYQPAEGDDKAVKESTFKVEKVAYADAKNLYVSPQGSASNDGSKNAPL
DLASAVVALPAGGTIWLNDGDYSATEIPVSASGQQKAVKNLFTVGNKAVIHGLQLKASHW
HVKGIEITEKPFRIEGSYNTIERVLAHHADDTGIQVTSTADVGRPLWASHNLILNSESHS
NQDPGKINADGFAVKMRVGEGNVIRGAFSHNNVDDGFDLFNKIEDGANGVVVIENSIAMN
NTSNGFKMGGEGQPVAHQVKHSIAVGNKLDGFTDNFNPGALIVEDNIALDNERFNFIFRP
SPYSGPEKQGVFKNNVSLKTKAGKYDDAVVGNIDNTNYFIKGDRSVNAQGKEVTVNNFVS
VIVPETFTRDAKGNLVLGDFLKKK
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgttgttcttcacaaaaatgtgattttgtacggaaacaccgttcttcacgcctc
gcagccgtcgcgttgacgaatgcattacttttcagcttcagtgcacacgccgcgacagaa
tcaacacccgtctggcacggtatcgcctttggtcaatcaacagacgtaaacttttcatcc
aatgttctgccggaaaaaattggtgttaatgatgtcaccattaacggtaagaagttagcg
ccgggagacaatgtcgatttgtccgcacctatcacgattgagagtcgtggcggaaagatt
gccaatacccatgatgggttgacgttcttctatacgcagttgcctgccaatgtgaatttt
acacttcagtctgatattaccgtggaacaatttgggccagaaaatggtgccaagcctgcg
gctcaggaaggggcaggaattctggtgcgcgatattatcggcattccgcgtcaggaaccg
ttgaaagaagggtatgaggaattccctgcggcatccaacatggtgatgaacgccatcatg
acgcaggataaaaaatctcatactgaaatcaagctacaggcgattttgcgtaatggcgtg
acacagccgtggggcaacgcgggcgcgaaaattaccaaaaccagctaccaggaaaatgtc
aatctggagcaaaccccgactttccgtctgaaactggaacgcaccaacgacggcttcata
acctcttatgcaccgaaaggcacggataactgggtatcaaaagaagtcaaaggcgcagat
gtcgttaccaagctggataaagaccactactacgtcggtttctttgcctcccgtaacgcc
aaaatcacagtcagcaatgcacagttgacgacgacaccggcgcaaaccaaagcctcaccg
gaatttaaagtcaaggcttacgatccgttactacaggtgatgtcatcgcctaaaaccacc
agcgaacactatgttgtacaggctaaagccaattacaacggcacgatcgccgtttcacaa
gacggtaaatcgctgggcgatgccaagcaggtaaaagctggcgagacgttctctctgcca
gcaaaaattgccggtaatagtgctgaattcaagatcgcctaccagcctgctgaaggggat
gataaagcagtaaaagagagcacgttcaaagttgaaaaagtggcttatgcagacgcaaaa
aatctgtatgtttcgccacaaggttcagccagcaacgacggcagtaaaaatgccccgctc
gatttagccagcgccgtcgtcgctctaccagcaggcggcaccatttggctcaacgatggc
gattacagcgcaactgaaatccctgtcagcgccagcggccagcaaaaagctgtcaagaac
ctgtttaccgtcggtaataaagcggtcattcacggcctgcaactaaaagctagccattgg
catgttaaagggattgaaatcaccgagaagccgttccgtatcgagggaagctacaacacc
atcgaacgcgttctggcgcaccacgctgacgataccggtattcaggtgacctcgacggcc
gatgttggcagaccactgtgggccagccataacctgatcctgaactcagaatctcacagc
aaccaggacccaggcaaaattaacgctgacggtttcgcggtgaaaatgcgtgtaggtgaa
ggcaacgtaatccgcggtgcgttctcgcacaacaacgtcgatgacggcttcgacctgttt
aacaaaattgaagacggtgcaaacggcgttgtggtgatcgagaattcaattgccatgaac
aacaccagcaatggcttcaaaatggggggtgaaggtcagccagtggcgcatcaggtcaaa
cacagcattgccgtgggcaataaacttgatggtttcactgataacttcaaccctggcgca
ctgatcgttgaagacaatatcgcgttagataacgagcgctttaacttcattttccgccca
agcccttactctggcccagaaaaacaaggtgtctttaagaacaacgtttcactgaaaacc
aaagcgggtaaatatgatgatgcagttgtcggaaatatcgataacaccaactacttcatc
aagggcgaccgttctgttaatgcgcaaggtaaggaagtcaccgtaaataacttcgtttcg
gttatcgtcccggagacgtttacacgtgatgccaaaggcaatctggtacttggcgatttc
ctgaagaagaaataa
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