Pseudomonas wadenswilerensis: LOY45_18915
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Entry
LOY45_18915 CDS
T11975
Symbol
rne
Name
(GenBank) ribonuclease E
Organism
pwd Pseudomonas wadenswilerensis
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
TcdA_TcdB
Motif
Other DBs
NCBI-ProteinID:
UVM20502
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All DBs
Position
4145598..4148744
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AA seq
1048 aa
AA seq
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MKRMLINATQPEELRVALVDGQRLYDLDIESGAREQKKANIYKGRITRIEPSLEAAFVDF
GSERHGFLPLKEISREYFKKSPEGRVNIKEVLSEGQEVIVQVEKEERGNKGAALTTFISL
AGRYLVLMPNNPRAGGISRRIEGEERNELREALNGLVAPADMGLIVRTAGLGRSSEEMQW
DLDYLLQLWTAIKEASQDRAAPFLIYQESNVIIRAIRDYLRQDIGEVLIDSIDAQEEALT
FIRQVMPQYASKIKLYEDSVPLFNRFQIESQIETAFQRVVDLPSGGSIVIDPTEALVSID
INSARATKGSDIEETALQTNLEAAEEIARQLRLRDIGGLIVIDFIDMTPAKNQRAVEEKV
RECLEADRARVQVGRISRFGLLEMSRQRLRPSLGESSGIVCPRCSGTGIIRDVESLSLAI
LRLIEEEALKDRTAEVRAQVPIPVAAFLLNEKRNSITKIELRTRARIVILPNDHLETPHF
EVQRLRDDSPEALSGQSSYEITAAETEEVQPTAATRTLVRQEAAVKTAPARANAPVPSEA
ATPVAAPVQHTPEPSLFKGLVKSLVSLFAGKDEPAAAAPVVAEKPATERPQRNEERRNGR
QQSRNRNGRRDEDRKPREERAERAPREERQPREAREEAPAREERAPRQPREERQPRAPRE
ERRPREDRPVRELREPLDAATPAVSEERPERAPREERQPREERAPREERAPREERAPREE
RAPREERQPRPPREERQPRPAEQAAEAAEEQLPNEELLQDDNLEGTEGERPRRRSRGQRR
RSNRRERQRDANGNLVEGSEEGSEEQPQATELGAELAAGLAVTAAVATSNISAAAEAEAN
QQAERATATVEEPAVVEVAASETVVVEAAQPVVEASEVAEVVETAQAAEVAAAPVVEQPF
TAPVEAPAAVEASIAPVVEAPVAAPAEVVEPVAAVEPEPEVQAPVVAEPVVAVEAVEAPA
PVVEPAPVEEPAPAVEAPASALTSSGRAPNDPREVRRRKREAEAAAAAAAAVAAEASAAV
VAEEAPAAPAEQVVEEKLETAEEHKPLV
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgctgattaacgcgactcaacccgaagagttgcgtgtagctctggtggac
ggccaacgtctctacgacctggacatcgagtccggcgcgcgtgagcagaagaaggccaac
atctacaaaggccggatcacccggatcgaacctagccttgaagccgctttcgtcgacttc
ggctccgagcgtcacggcttcctgccgctgaaggaaatctcccgcgaatacttcaagaag
tcgcccgaaggccgggtgaacatcaaggaagtgctcagcgaaggccaggaagtcatcgtc
caggtcgagaaagaagagcgcggcaacaagggcgctgccctgaccaccttcatcagcctg
gccggtcgttacctggtactgatgccgaacaacccgcgtgccggtggcatctcccgtcgc
atcgaaggcgaagagcgcaacgaactgcgcgaggccctcaacggcctggtcgcccctgcc
gacatgggcctgatcgtgcgcactgccggccttggccgcagcagcgaagaaatgcagtgg
gacctcgactacctgctgcagctgtggaccgcgatcaaggaagcctcccaggaccgcgcc
gcgccattcctgatctaccaggaaagcaacgtcatcatccgcgccatccgtgactacctg
cgtcaggatatcggcgaagtactgatcgacagcatcgacgcccaggaagaagccctgacc
ttcatccgccaggtgatgccgcagtacgccagcaagatcaagctgtacgaagacagcgtg
ccgctgttcaaccgtttccagatcgaaagccagatcgaaaccgccttccagcgcgtcgtc
gacctgccgtccggcggctcgatcgtcatcgacccgaccgaagccctggtctccatcgac
atcaactcggcgcgcgccaccaaaggcagcgacatcgaggaaaccgccctgcagaccaac
ctggaagcggctgaggaaatcgcccgccagctgcgtctgcgtgacatcggcggcctgatc
gtgatcgacttcatcgacatgaccccggccaagaaccagcgcgccgtggaagaaaaagtc
cgcgaatgcctggaagccgaccgtgcccgtgtacaggttggccgcatctcgcgcttcggc
ctgctggaaatgtcccgtcagcgcctgcgcccatcgcttggcgaaagcagcggcatcgtc
tgcccacgctgcagcggcaccggcatcatccgtgacgtcgaatcgctgtcgctggccatc
ctgcgcctgatcgaagaagaagccctgaaagaccgcaccgccgaagtccgcgcccaagtg
ccgattccggttgcagccttcctgctcaacgaaaaacgcaattcgatcaccaagatcgag
ctgcgcacccgggcccgtatcgtcattctgccgaacgatcacctggaaaccccgcatttc
gaagtccagcgcctgcgcgacgacagcccggaagcccttagcggccagtccagctacgaa
atcaccgccgccgagaccgaagaagtccagccgactgccgccacccgcaccctggtgcgc
caggaagccgccgtcaagaccgctccggcccgcgccaacgccccggtaccttccgaagct
gccacaccagtggccgctccggtccagcacacacctgagccaagcctgttcaaaggtctg
gtgaagtcgctggtcagcctgttcgccggcaaggacgaacctgccgccgcagcgcctgtg
gttgccgagaagcctgccaccgaacgcccgcagcgcaacgaagaacgccgcaacggtcgc
cagcagagccgcaaccgcaacggccgccgtgatgaagaccgcaaaccgcgtgaagaacgt
gccgagcgcgccccacgtgaagagcgtcagccacgcgaagcccgcgaagaagcacctgcc
cgtgaagagcgcgcaccacgtcaaccgcgtgaagagcgtcaaccacgcgcaccacgtgaa
gagcgccgccctcgcgaggaccgtccggtccgcgaactgcgcgagccactggacgcagcc
accccggccgtaagcgaagaacgccctgaacgcgccccgcgcgaagagcgtcagcctcgt
gaagaacgcgcaccacgtgaagagcgcgcaccgcgcgaagaacgtgctccgcgtgaagaa
cgtgccccacgtgaagagcgccaaccgcgtccgccgcgtgaagagcgtcagcctcgccca
gccgaacaggctgctgaagctgctgaagagcaactgccgaacgaagagctgctgcaggat
gacaacctggaaggcaccgaaggcgaacgccctcgccgccgctcccgtggccagcgtcgc
cgcagcaaccgtcgcgagcgtcaacgcgatgccaacggcaacctggtagaaggttcggaa
gaaggcagcgaagagcagccgcaagccaccgagctgggtgctgaactggccgctggcctg
gccgtgactgccgctgttgccaccagcaacatcagcgccgctgccgaagccgaagccaac
cagcaggccgaacgcgccactgccacagtcgaagagccggctgttgttgaagttgctgcc
agcgaaaccgtcgtcgtcgaagctgctcagccagtggttgaagcctctgaagtcgccgaa
gtggttgaaaccgctcaggctgctgaagtcgctgccgcaccggttgtcgagcaacccttt
actgccccggtcgaagcaccagcagcagtagaagccagtatcgctccagtagtcgaagcc
cctgttgctgcgccagctgaagtggtcgagcctgttgccgcggtcgagccagagcctgaa
gtccaggcaccggttgtggccgagccagtggttgccgtcgaagcagtcgaagcgcctgcg
ccagttgtcgagccagcaccggttgaagagccggcacctgctgtcgaagcaccggccagc
gccctgaccagcagcggtcgcgcgccgaacgatccacgtgaagtacgccgtcgcaagcgt
gaagccgaagctgccgcagccgccgctgcagcggtcgccgccgaagccagcgctgccgta
gtcgctgaagaagcgcctgctgcaccggctgaacaagtggtcgaagagaaactggaaacc
gcagaagagcataaaccgctcgtctga
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