Pseudomonas wadenswilerensis: LOY45_22280
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Entry
LOY45_22280 CDS
T11975
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pwd Pseudomonas wadenswilerensis
Pathway
pwd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pwd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LOY45_22280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pwd03021
]
LOY45_22280
Transcription machinery [BR:
pwd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LOY45_22280
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
HTH_23
HTH_24
HTH_7
GerE
HTH_Tnp_4
HTH_28
TnsD
Motif
Other DBs
NCBI-ProteinID:
UVM21133
LinkDB
All DBs
Position
4875675..4876169
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AA seq
164 aa
AA seq
DB search
MPSAPSSSLEGLYLDHHNWLTGWLRRRLGCPDSAADLAQDTFMRLLQARQTPLLNEPRAF
LTTVAKRVLCNHYRRQDLERAYLQALAQLPEDLAPSEEHRAIIFETLLELDRLLDGLPLP
VKRAFLMAQVDGLSYSAIGVQLGISLATVKRYLNKAAMRCYFAL
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
gtgcccagcgctccctcttcctcgctcgaaggcctctacctcgaccatcacaactggctg
accggctggttgcgccggcgtctcggctgccccgacagcgccgcggacctggcccaggac
accttcatgcgcctgctccaggcccgccaaacgccgctgctcaacgagccgcgggcgttc
ctcaccaccgtggccaaacgtgtgctgtgcaaccactaccgccgccaggacctggaacgc
gcctacctccaggcactggcgcagctgccggaagacctggcgccatcggaagaacaccgg
gcaattattttcgagaccctgcttgagctcgaccgcctgctcgacggcctgcccttgccg
gtcaagcgcgccttcctgatggctcaggtcgatggcctgagctacagcgcgatcggtgtg
caactgggcatctccctggccacggtcaagcgctacctgaacaaggcggccatgcgctgt
tactttgccctgtga
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integrated database retrieval system
