Pseudomonas wadenswilerensis: LOY45_26530
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Entry
LOY45_26530 CDS
T11975
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pwd Pseudomonas wadenswilerensis
Pathway
pwd03420
Nucleotide excision repair
pwd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pwd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LOY45_26530 (uvrD)
03430 Mismatch repair
LOY45_26530 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pwd03400
]
LOY45_26530 (uvrD)
Enzymes [BR:
pwd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LOY45_26530 (uvrD)
DNA repair and recombination proteins [BR:
pwd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LOY45_26530 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
LOY45_26530 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UVM21927
LinkDB
All DBs
Position
5768145..5770328
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAAPVGRQLVLAGAGSGKTRVLVHRIAWLIQVVQASPHSIL
SVTFTNKAAAEMRQRIEQLMGINPAGMWVGTFHGLAHRLLRAHWQEAGLNQNFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLGTMRSIYEAYE
AACQRAGVIDFSELLLRALDLWRDHPGLLEHYQRRFRHVLVDEFQDTNAVQYAWLRLLAK
GGDSLMVVGDDDQSIYGWRGAKIENIHQYTADFPDAELIRLEQNYRSTAGILKAANALIA
NNSGRLGKELWTDGGDGEPLSLYAAFNEHDEARYVVESIESALKTGLARNDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINVPPRGI
GEKTVEAIREHARHAQVSMWESMSLLIANKALKGRAASALGAFMEMIENLAAKVLEMPLH
LMTQTVIEQSGLIVYHQEEKGEKGQARVENLEELVSAARNFENSEEDAELSPLAAFLGHA
SLEAGDAQADEHEDSIQLMTLHSAKGLEFPHVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQQLVMTYAETRRLYGSETYNKVSRFVREIPTGLVQEVRLSNSVSRPFGSGQ
QQNSSSLFANANIPQTAFNLGQRVQHAVFGEGVILNFEGSGAQARVQVNFAEGSKWLMLG
YAKLEAL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctctctcctgttgaattctctcaacgacgcccaacgccaggctgta
gctgcgccggttggtcgtcagttggtcctggccggtgccggctccggcaagacccgtgtg
ctggtgcaccgcatcgcctggttgatccaggtcgtgcaggcctcgccgcactcgatcctg
tcggtgaccttcaccaacaaggccgctgccgagatgcgccagcgtatcgaacagctgatg
ggcatcaacccggccggcatgtgggtaggcaccttccacggcctggcgcaccgcctgttg
cgcgcgcactggcaagaggcggggctgaaccagaacttccagatcctcgacagcgacgac
cagcagcgcctggtcaagcgggtaatccgcgagctgggcctggatgaacagcgctggccg
gcgcgccaggcgcaatggttcatcaacggccagaaagacgaaggcctgcgcccgcaacat
atccaggccagtggtgacctgttcctgggcaccatgcgcagcatctatgaagcctacgag
gcagcttgccagcgcgccggcgtcatcgacttctccgagctgctgctgcgcgccctggac
ctgtggcgtgaccaccccggcctgctcgaacactaccagcggcgcttccgccatgtgctg
gtcgacgagttccaggataccaacgccgtgcagtacgcctggctgcgactgctggccaag
ggtggcgacagcctgatggtggtcggcgacgacgaccagtcgatttacggctggcgcggc
gccaagatcgagaacatccaccagtacacggccgacttccccgacgccgagttgatccgc
ctggagcagaactaccgctccaccgccggcatcctcaaggcggccaacgccctgattgcc
aacaacagcgggcgtttgggcaaagagctgtggaccgacggtggcgatggcgagccgctg
agcctgtacgccgccttcaacgaacacgacgaagcccgctacgtggtcgagagcatcgaa
agcgcgctcaagaccggcctggcccgcaacgatatcgccatcctttatcgctccaacgcc
cagtcgcgggtgcttgaagaagcgctgctgcgcgaacgcattccttaccgcatctatggt
ggccagcgcttcttcgagcgcgccgagatcaagaacgccatggcctacctgcgcctgctc
gaaggccgcggcaacgacgccgcccttgagcgggtaatcaacgtgccaccgcgtggcatc
ggcgagaaaaccgtcgaagcgattcgcgagcacgcgcgccacgcccaggtctcgatgtgg
gaatcgatgagcctgctgatcgccaacaaggcgctcaaaggccgcgctgccagtgccctg
ggcgcgttcatggaaatgatcgaaaaccttgctgccaaggtcctggagatgcccctgcac
ctgatgacccagacggttatcgagcagtccgggctgatcgtctatcaccaggaagaaaaa
ggcgaaaaaggccaggcccgggtagaaaaccttgaggaactggtcagcgccgcgcgcaac
ttcgaaaacagcgaagaagacgccgagctttcgccattggcggcgttcctcggccacgcc
tcgctggaagccggcgacgcccaggccgacgagcacgaagacagcatccagctgatgacc
ctgcacagcgccaagggcctggaattcccccatgtgttcctggtcggcatggaagaaggc
ctgttcccgcacaagatgagcctggaagaacccggccgcttggaagaagagcgccgcctg
gcctacgtcggcatcacccgcgccatgcagcagttggtgatgacctacgccgaaacccgc
aggttgtatggcagcgagacctacaacaaggtctcgcgcttcgtacgcgagattccgacc
ggcctggttcaggaagtacgcttgtccaacagcgtcagccgtccgttcggctcgggccag
cagcagaactcgagcagcctgtttgccaacgccaacatcccgcagaccgccttcaatctg
ggccagcgggtgcagcacgcggtattcggcgaaggcgtgatcctcaacttcgagggttcc
ggcgcccaggcccgggtccaggtcaacttcgccgagggcagcaaatggctgatgctcggt
tacgccaagcttgaggccctgtag
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