KEGG   Pyrococcus woesei: ACMFNG_00805
Entry
ACMFNG_00805      CDS       T11319                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
pwe  Pyrococcus woesei
Pathway
pwe03030  DNA replication
pwe03410  Base excision repair
pwe03420  Nucleotide excision repair
pwe03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pwe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ACMFNG_00805
   03410 Base excision repair
    ACMFNG_00805
   03420 Nucleotide excision repair
    ACMFNG_00805
   03430 Mismatch repair
    ACMFNG_00805
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pwe03032]
    ACMFNG_00805
   03400 DNA repair and recombination proteins [BR:pwe03400]
    ACMFNG_00805
Enzymes [BR:pwe01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     ACMFNG_00805
    6.5.1.6  DNA ligase (ATP or NAD+)
     ACMFNG_00805
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     ACMFNG_00805
DNA replication proteins [BR:pwe03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    ACMFNG_00805
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     ACMFNG_00805
DNA repair and recombination proteins [BR:pwe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     ACMFNG_00805
   NER (nucleotide excision repair)
    Other NER factors
     ACMFNG_00805
   MMR (mismatch excision repair)
    Other MMR factors
     ACMFNG_00805
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase Tcp10_C DUF7647
Other DBs
NCBI-ProteinID: XTU89881
LinkDB
Position
138355..140040
AA seq 561 aa
MRYLELAQLYQKLEKTTMKLIKTRLVADFLKKVPDDHLEFIPYLILGEVFPEWDERELGV
GEKLLIKAVAMATGIDAKEIEESVKDTGDLGESIALAVKKKKQKSFFSQPLTIKRVYQTL
VKVAETTGEGSQDKKVKYLADLFMDAEPLEAKYLARTILGTMRTGVAEGLLRDAIAMAFH
VKVELVERAYMLTSDFGYVAKIAKLEGNEGLAKVQVQLGKPIKPMLAQQAASIRDALLEM
GGEAEFEIKYDGARVQVHKDGSKIIVYSRRLENVTRAIPEIVEALKEAIIPEKAIVEGEL
VAIGENGRPLPFQYVLRRFRRKHNIEEMMEKIPLELNLFDVLYVDGQSLIDTKFIDRRRT
LEEIIKQNEKIKVAENLITKKVEEAEAFYKRALEMGHEGLMAKRLDAVYEPGNRGKKWLK
IKPTMENLDLVIIGAEWGEGRRAHLFGSFILGAYDPETGEFLEVGKVGSGFTDDDLVEFT
KMLKPLIIKEEGKRVWLQPKVVIEVTYQEIQKSPKYRSGFALRFPRFVALRDDKGPEDAD
TIERIAQLYELQEKMKGKVES
NT seq 1686 nt   +upstreamnt  +downstreamnt
atgaggtatctagagcttgctcaactttatcaaaagttagaaaagacaactatgaaactt
ataaagactagacttgtcgccgacttcctgaaaaaagtaccagatgatcatctggagttc
attccctatctaattcttggagaagtttttccagagtgggatgaaagggagctgggtgtg
ggagaaaagctgttaattaaagctgtagcaatggccactggaattgacgcaaaagaaatc
gaagagtctgtaaaagatactggagaccttggagagagcatagccttagctgtaaagaaa
aagaagcagaagagcttcttctctcagcccctcacaataaagagggtatatcaaaccctt
gtaaaggttgcagaaacaacgggggagggaagccaagataaaaaagtaaagtatctagct
gatttgttcatggacgcagaacctttagaagctaagtatcttgctcgtacaatcttagga
acaatgagaacaggagttgcagaaggattgcttagagatgcaatagcaatggcattccac
gtaaaggtagagcttgttgagagagcttacatgctaacgagtgatttcggatatgtagct
aaaatagcaaagcttgaaggaaatgaagggctagcaaaagttcaagttcaactcggaaag
ccaataaagccaatgcttgcccagcaagctgctagcataagagatgcacttctcgagatg
ggtggagaggcagagttcgagattaaatacgatggagcaagggtgcaggtgcacaaggat
ggctcaaaaattatagtctattctagaagactggagaacgtcaccagagcgattccagaa
attgttgaggctctaaaagaggcaataatacctgaaaaggcaatagtggaaggagaactt
gtggcaattggagaaaacggaagaccattgcccttccaatatgtgcttagaaggtttagg
agaaagcataacatagaagaaatgatggaaaagatacctctcgagctcaacttattcgac
gttctctacgtagatggacaaagcttgattgacactaagttcattgatagaagaagaaca
cttgaagaaataataaagcagaatgaaaagataaaggtagcagaaaacctaataacaaag
aaagtcgaggaagcagaggcattttacaagagagcactcgaaatggggcacgagggattg
atggccaagaggttagatgcagtctacgaaccaggtaacagaggaaagaagtggttgaag
ataaagcccacaatggagaacttagatttagtaatcataggagcagaatggggagaggga
agaagagcccatctctttggttcattcatcctgggagcatatgatccagaaacaggagaa
ttcctagaggtaggaaaagtgggaagtggattcacagatgatgacttagttgagtttacg
aagatgctaaagccccttattataaaagaggaaggaaagagagtctggctccagcccaaa
gttgttattgaagtgacatatcaagaaattcagaagagtccaaaatacagaagtggattt
gcattaaggttcccaaggttcgttgcacttagagatgataaaggaccagaagatgcagat
acaatagagagaatcgcacaactttacgagttgcaagaaaagatgaaaggaaaagtggaa
agctaa

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