Pyrococcus woesei: ACMFNG_02565
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Entry
ACMFNG_02565 CDS
T11319
Name
(GenBank) transcription elongation factor Spt5
KO
K15172
transcription elongation factor SPT5
Organism
pwe Pyrococcus woesei
Brite
KEGG Orthology (KO) [BR:
pwe00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
ACMFNG_02565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pwe03021
]
ACMFNG_02565
03019 Messenger RNA biogenesis [BR:
pwe03019
]
ACMFNG_02565
Transcription machinery [BR:
pwe03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
ACMFNG_02565
RNA polymerase I system
ACMFNG_02565
Messenger RNA biogenesis [BR:
pwe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
ACMFNG_02565
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt5-NGN
KOW
MSSS
Ribosomal_uL24m-like
DUF411
KOW2_Spt5
KOW4_SPT5
SH3_KIN17_C
KOW1_SPT5
GPKOW_C
Motif
Other DBs
NCBI-ProteinID:
XTU90203
LinkDB
All DBs
Position
435173..435631
Genome browser
AA seq
152 aa
AA seq
DB search
MAGKIFAVRVTHGQEETTAKLIYSKVRTYNLPIYAILAPSRVKGYIFVEAPNKGVVDEAI
RGIRHARGVLPGEVPFKEIEHFLEEKPAVSGLEPGDLVEVIAGPFKGQKAKVVKIDESKD
EVVVQFIDAIVPIPVTIKGDYVRLISKLQKEE
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atggcagggaaaatctttgctgtgagagtgactcatggacaggaagagacaactgcaaag
ctaatttacagtaaggttagaacttacaatcttcctatctatgctattctggctccttct
agagttaaaggatatatttttgttgaggctccaaataaaggcgttgtggatgaggcaata
aggggaattagacacgctagaggtgttcttccaggagaggttccctttaaggaaatagag
cactttctagaggagaagccagctgttagtgggcttgaacctggagacctcgttgaagtt
attgccggtccatttaagggacaaaaggcaaaagttgtcaaaattgatgagagtaaggat
gaagttgttgttcagttcattgatgccatagttcccattcccgttaccataaagggagat
tacgttaggcttataagcaagctgcagaaggaggagtga
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