Pyrococcus woesei: ACMFNG_04320
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Entry
ACMFNG_04320 CDS
T11319
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
pwe Pyrococcus woesei
Brite
KEGG Orthology (KO) [BR:
pwe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pwe03016
]
ACMFNG_04320 (endA)
Enzymes [BR:
pwe01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
ACMFNG_04320 (endA)
Transfer RNA biogenesis [BR:
pwe03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
ACMFNG_04320 (endA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Sen15
tRNA_int_end_N2
DUF434
Motif
Other DBs
NCBI-ProteinID:
XTU90506
LinkDB
All DBs
Position
complement(772804..773316)
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AA seq
170 aa
AA seq
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MKTVIEFYLSGDRVYSEREKAINQLHINRGYGELKGKRLFLSLIEAAYLLEKGWIKVLDG
ERELSFYDVVSLGKKKDEDFDVKYLVYKDLRDRGYIVKSALKFGSHYRVYRKGAEHSDWL
VWVVRESQKLSPNDITARARVAHGVRKTMVLAVVDEDGDVVYYKVEWTKF
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagttatagagttctaccttagtggggacagagtgtatagtgagagggagaag
gcgataaaccagcttcacataaataggggatacggggaactaaagggaaaaagattgttc
ctctccctaatagaggccgcatatttattggaaaaggggtggataaaggttttagatgga
gaaagagaactctccttttatgacgtagtctccctgggaaaaaagaaagatgaggatttt
gatgtaaagtatttggtttataaggatcttcgagatcgaggctacatagtaaaatccgcc
ctaaaatttggttctcattatagggtttacagaaaaggggcagagcactctgattggctc
gtttgggttgtgagagaaagccaaaagctttctccaaacgatattacagctagagcaagg
gtagctcatggtgtgagaaaaacaatggttctagccgttgtcgatgaagatggagatgtg
gtctattacaaagtggagtggactaagttctag
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