Pyrococcus woesei: ACMFNG_08155
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Entry
ACMFNG_08155 CDS
T11319
Name
(GenBank) RNase J family beta-CASP ribonuclease
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
pwe Pyrococcus woesei
Pathway
pwe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pwe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACMFNG_08155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwe03019
]
ACMFNG_08155
Messenger RNA biogenesis [BR:
pwe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACMFNG_08155
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GFIT
Motif
Pfam:
RNase_J_b_CASP
RMMBL
Lactamase_B
Lactamase_B_2
NSUN5_N
NERD_plant
Motif
Other DBs
NCBI-ProteinID:
XTU89347
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Position
1466365..1467684
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AA seq
439 aa
AA seq
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MIKIYTLGGYEEVGKNMTAVEYEGEIVIIDMGIRLDRVLIHEDVEFQKMSSKELRKLGAI
PDDRPIRDKKVVAIALSHGHLDHIGAVGKLAPHYPDVPIYGTPYTIRLAKSEIKGEEYFE
VTNPLYETNYGEIVQVSENLAIEFVQITHSIPHSSIVVIHTPEGAVVYACDYKFDNNHPY
GEKPDYKRLKELGKEGVKVLIAESTRVAEETKTPSEAVAKMLLEDFFLYEGMEADGLIAT
TFASHITRLQALIEIANKMGRQAVFIGRSLAKYTGIAKQLGLIKMKGSRVLRSPNAISKV
LKEVSQARENYLLVVTGHQGEPGAILTRMANGELYDIGPRDTVVFSAGVIPNPLNIAQRY
ALETKLRMKGVRMIKNLHVSGHASKEDHRYLIRMLNPENIVPAHGEFRMLTHYAELAEEE
GYMIGKDVFISRNGHAITI
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaatctacactctcgggggttacgaggaagtcggaaagaacatgactgctgtt
gaatacgaaggggagatagtgataatagacatgggaataaggctcgacagggttttgatt
cacgaagacgttgagttccagaagatgagctcaaaagagctaaggaagcttggagcaata
ccggacgacaggccaatcagggataagaaagtggttgcaatagcactctcccacgggcac
ttggatcacataggggcagtgggaaagctagccccccactatcctgacgttccaatatat
ggaaccccctacacgattaggttagcgaagagcgaaataaagggagaagagtattttgag
gtcacaaacccactctatgagaccaattatggggagattgtccaagtaagcgagaatctg
gccatagaatttgtccagataacccattcaattcctcactcttcgatagttgtaatccac
accccagagggagctgtcgtttacgcttgcgactacaaatttgacaacaatcacccctac
ggggagaaacccgactacaaaaggctaaaagagcttggaaaagaaggagttaaggtttta
atagctgaatcaacgagggtcgctgaagaaacaaaaactccaagcgaggccgttgcgaag
atgctcctcgaagacttcttcctatatgaggggatggaggccgatggacttatagctaca
acctttgcgagccacataacgaggcttcaagcgctgatagagatagcaaataagatggga
aggcaagctgtattcataggaaggtctctagccaagtatactggaatagcaaagcagttg
ggcttgataaagatgaaaggttccagagttttgaggagcccaaatgcaataagcaaggtt
ttaaaggaagtttcacaggcgagagaaaattatcttctcgtggtaactggtcatcagggt
gagccgggggcaatactaacaagaatggctaacggagagctctatgatatagggccgagg
gatacagttgtcttttcggcaggagtcataccgaaccccttaaatatagctcagaggtat
gccctagagacaaagttaaggatgaaaggggtaagaatgataaagaatttgcacgtaagt
ggtcatgcaagcaaggaggatcacaggtatttaataaggatgctcaacccagagaacata
gttcccgcgcatggggagttcaggatgctcacgcactatgcagaattggcagaagaggaa
ggatatatgattggcaaggatgttttcatttcaagaaacggtcatgcaataacaatttag
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