Pyrococcus woesei: ACMFNG_09775
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Entry
ACMFNG_09775 CDS
T11319
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
pwe Pyrococcus woesei
Pathway
pwe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pwe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ACMFNG_09775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pwe03021
]
ACMFNG_09775
Transcription machinery [BR:
pwe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
ACMFNG_09775
Prokaryotic type
Archaeal type
TFB
ACMFNG_09775
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
HARE-HTH
BRF2-like_C_cyclin_rpt
Trm112p
HTH_Tnp_ISL3
RB_B
Zn_ribbon_3
A2L_zn_ribbon
Auto_anti-p27
Ribosomal_S27e
Zn_ribbon_IS1595
YceG
RPA_interact_C
Motif
Other DBs
NCBI-ProteinID:
XTU89635
LinkDB
All DBs
Position
complement(1760329..1761231)
Genome browser
AA seq
300 aa
AA seq
DB search
MNKQKVCPACESAELIYDPERGEIVCAKCGYVIEENIIDMGPEWRAFDASQRERRSRTGA
PESILLHDKGLSTEIGIDRSLSGLMREKMYRLRKWQSRLRVSDAAERNLAFALSELDRIT
AQLKLPRHVEEEAARLYREAVRKGLIRGRSIESVMAACVYAACRLLKVPRTLDEIADIAR
VDKKEIGRSYRFIARNLNLTPKKLFVKPTDYVNKFADELGLSEKVRRRAIEILDEAYKRG
LTSGKSPAGLVAAALYIASLLEGEKRTQREVAEVARVTEVTVRNRYKELVEKLKIKVPIA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
gtgaataagcaaaaggtttgtcctgcttgtgaatctgcggaacttatttatgatccagag
aggggggaaatagtctgtgccaagtgcggttatgtaatagaagagaacataattgatatg
ggtcctgagtggcgtgcttttgatgcttctcaaagggaacgcaggtctagaactggtgca
ccagaaagtattcttcttcatgacaaggggctttcaactgaaattggaattgacagatcg
ctttccggattaatgagagagaagatgtaccgtttgaggaagtggcagtccagattaaga
gttagtgatgcagcagagaggaacctagcttttgccctaagtgagttggatagaattact
gctcagttaaaacttccaagacatgtagaggaagaagctgcaaggctgtacagagaggca
gtgagaaagggacttattagaggtagatctattgagagcgttatggcggcatgtgtttac
gctgcttgtaggttattaaaagttcccaggactctggatgagattgctgatattgctaga
gttgataaaaaggaaattggaagaagttacagattcattgcgagaaatctcaatttaact
cccaaaaaactatttgtcaagccaactgattatgtaaataaatttgcggatgagctcgga
ttaagtgaaaaagttaggagaagagctattgaaattcttgatgaggcttataaaaggggg
ttaactagtggtaagagtccagctggtttagtagcagcagccctatacatagcttcttta
ttggagggagagaagagaacacaaagagaagttgccgaagttgctagagtaactgaagtg
actgtgagaaatagatacaaggagctcgtagagaagttgaagattaaagttcctatagca
tga
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