Pseudoxanthomonas winnipegensis: MWN52_00865
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Entry
MWN52_00865 CDS
T09190
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pwi
Pseudoxanthomonas winnipegensis
Brite
KEGG Orthology (KO) [BR:
pwi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pwi03032
]
MWN52_00865
03400 DNA repair and recombination proteins [BR:
pwi03400
]
MWN52_00865
Enzymes [BR:
pwi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MWN52_00865
DNA replication proteins [BR:
pwi03032
]
Prokaryotic type
DNA Topoisomerases
MWN52_00865
DNA repair and recombination proteins [BR:
pwi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MWN52_00865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WJI17745
LinkDB
All DBs
Position
197537..198586
Genome browser
AA seq
349 aa
AA seq
DB search
MADVAKLAGLVYVSDAEPGYSRRRAGKGFGYRDPEGRAVRDALTLTRIRALAIPPAYTEV
WICLQERGHLQATGRDARRRKQYRYHPDWMQVTGEGKFDRIVQFGAALPRLRRRLRQDLK
RPGFPREKVLAIVVAVMAETLVRIGNATYARENRSFGLTTLRNRHVAFARDRVRLKFRGK
GGLEHDIGIDDARLVKLIRAVQHLPGQALFQYQDDDGTLQPVDSGQVNAYLHEVMGEDFT
AKDFRTWGGTLAAFKLLAATPLPEPPSKAALNRAKNGVIKEVARALGNTPAVCRKAYIDP
CVFVAWEDGRLQKIAGDARGERQWEQAALKLMAKVHKVPLGKTKRAAAA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgtggccaagctggccggcctggtctatgtcagcgatgccgagcccggttac
tcgcggcgacgcgccggcaagggcttcggctatcgcgacccggaaggccgcgcggtgcgc
gatgcgctgaccctgacccgcatccgcgcgctggccatcccgccggcctataccgaggtc
tggatctgcctgcaggagcgcgggcatctgcaggccaccgggcgcgatgcgcgccggcgc
aagcagtaccgctatcacccggactggatgcaggtcaccggcgagggcaagttcgaccgc
atcgtccagttcggcgccgccctgccgcgcctgcgtcggcgcctgcgccaggacctcaag
cgccccggcttcccgcgcgagaaggtgctggcgatcgtggtggcggtgatggccgagacg
ctggtgcgcatcggcaacgccacctacgcccgcgagaaccgctccttcggcctgaccacg
ctgcgcaaccggcacgtggcctttgcccgcgaccgggtgcggctgaagttccgcggcaag
ggcgggctggagcacgacatcggcatcgacgatgcgcgcctggtcaagctgatccgcgcg
gtgcagcacctgccggggcaggcgctgttccagtaccaggacgacgacggcacgctgcag
ccggtcgactccgggcaggtcaacgcctacctgcacgaggtgatgggcgaggacttcacc
gccaaggacttccgcacctggggcggcacgctggcggcgttcaagctgctggcggccacg
ccgctgcccgagccgcccagcaaggccgcgctgaaccgcgccaagaacggggtgatcaag
gaggtcgcgcgggcgctgggcaatacgccggcggtgtgccgcaaggcgtacatcgacccc
tgcgtgttcgtggcctgggaggacgggcgcctgcagaagatcgccggcgacgcgcgcggc
gagcggcagtgggagcaggccgcgctgaagctgatggccaaggtccacaaggtcccgctc
ggcaagaccaagcgcgcggccgcggcctga
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