Pseudoxanthomonas winnipegensis: MWN52_14305
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Entry
MWN52_14305 CDS
T09190
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
pwi
Pseudoxanthomonas winnipegensis
Brite
KEGG Orthology (KO) [BR:
pwi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwi03019
]
MWN52_14305 (hrpA)
Enzymes [BR:
pwi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MWN52_14305 (hrpA)
Messenger RNA biogenesis [BR:
pwi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MWN52_14305 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
HA2_N
nSTAND3
SRP54
T2SSE
AAA_30
NACHT
AAA_25
DUF4145
AAA_23
PhoH
TsaE
ABC_tran
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WJI14790
LinkDB
All DBs
Position
complement(3246478..3250662)
Genome browser
AA seq
1394 aa
AA seq
DB search
MASIAPLPTQPDAARRAIDGALSRDRGRLHGLWSRWKAAPEDAQLRARFGQALAESVAAC
QARAANLPAVTLDQALPIAREGERIVELIRQHQVVVIAGETGSGKTTQLPKLCLAAGRGA
AGMIGCTQPRRIAARAVARRVAEELQVPMGGAVGYQVRFNDNVGDDTRIKFMTDGILLAE
IASDRWLSNYDTIIVDEAHERSLNIDFLLGYLKQLLRKRRDLKVIVTSATIDTARFAAHF
DDAPVVSVEGRTFPVEVRYRPLEEPGVESGDSGLDTADGGERPTSRASANPDSRLPNPGL
TVNDAIVAAVDEITREDARGDVLIFLPGEREIRDAHQALERRKYRHTEVLPLYARLSAKD
QDAVFNPGAQRRIVLATNVAETSLTVPRIRYVVDPGLARVKRYSPRQKLDRLHIEPVSQA
SANQRMGRCGRVAEGICVRLYAQADFEARPRYTDPEIRRSSLAGVILRMLQLGLGRIEDF
PFLEAPDERAIADGWQQLVELGAVTEADRHGLRKLTEVGRRMARLPVDVKLARMLVAAQA
HGCLRPMLVIAAFLGIQDPRERPPEAREAADNAHAKFADARSEFVGILRLWDGYAQAHEE
LTQSKLRDWCGRHFLGFLRMREWRELHRQLRVLCEELGWAEEPAAAAMAPLLAGSPAAPV
GQDGKPASRPTRGELHRAARLAREGKASLPGAAPAQAAPAPAAQDDSAPRISERERSAAY
QSLHRALIAGLPTQVGHRTEKGDFLAPRQRRFHLFPGSALAKKPPAWVLTATLLDTQRVW
GLTNAAIEPDWVIAEVPQLLARKHFDPHWSRAQGQVLASEQISLFGLVLAPKKPVHYGRI
APQEAHELFVRQGLVPGEINTRASFVADNGKVLAAAHEEEAKLRRAGIVADEDWQARWYL
DRIPGELHSAAGLDAWWKTLPDDKRGRLRWSLADLLPGEGSEADRYPKYFALGDARLPLH
YTFEPGAEDDGVTLEVPLHLLNALDAARLSWLAPGFVAEKAAALIRTLPKAQRRNFVPAP
DFGRAFFEAHRKPSGDDLRGELARFLAKATGVAVSALDFDEAALEPHLRMHLRLRDEQGK
VLASSRDLEALRERFGTQAGHAFAARAGRALASEGLHAFPHDPIPLQVPGEAGVPAYPAL
VDEGDSAALRIFADRAQAAAAHPRGVRRLLELALADKVKQARKQLPVSPKTGLLYAAIES
QERLRGDIVDAALNAVLAEGLGEIRDPGSFAQRRDAAGKALFGEAMERLKLAEAILAGVA
ELKPELEAPLMGWARGNLDDLTAQLAALVHPGFLRDTPAPALSQFPRYLKAMKLRAERAK
RDPTRDQQRMLELVPFMQALEDAAALGRAASDDWQALRWDLEELRVSLFAQELGARSGVS
PKKLAQRVAALQGR
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaatcgccccgcttcccacccagcccgacgccgcgcggcgcgccatcgatggc
gcgctgagccgcgaccgtggccgcctgcacggcctgtggtcgcgctggaaggccgcgccg
gaggacgcgcagctgcgcgcgcgcttcggccaggcgctggccgagtcggtggccgcctgt
caggcgcgcgcggccaacctgccggcggtgaccctggaccaggcgctgccgatcgcgcgc
gagggcgagcggatcgtcgagctgatccgccagcaccaggtcgtggtgatcgccggcgag
accggctcgggcaagaccacccagctgcccaagctgtgcctggcggccgggcgcggcgcg
gccggcatgatcggctgcacccagccgcgccgcatcgccgcgcgcgcggtggcccggcgc
gtggccgaggagctgcaggtgcccatgggcggcgcggttggctaccaggtgcgcttcaac
gacaacgtcggcgacgacacgcgcatcaagttcatgaccgacggcatcctgctggcggag
atcgccagcgaccgctggctgtcgaactacgacacgatcatcgtcgacgaggcgcacgag
cgcagcctcaacatcgacttcctgctggggtatctgaagcagctgctgcgcaagcgccgc
gacctgaaggtcatcgtcacctcggcgaccatcgacacggcgcgcttcgccgcgcacttc
gacgacgcgccggtggtcagcgtggaagggcgcaccttcccggtggaagtgcgctatcgg
ccgctggaggagccgggagtggagagcggggattcgggattggacacagcggatggcggc
gagcgcccgacatcccgtgcttccgccaatcccgactcccgactccccaatcccggcctc
accgtcaacgatgcgatcgtcgcggcggtcgacgagatcacccgggaagacgcgcgcggc
gacgtgctgatcttcctgccgggcgagcgcgagatccgcgacgcgcaccaggcgctggaa
cggcgcaagtaccgccataccgaggtgctgccgctatatgcgcggctgtcggccaaggac
caggacgcggtgttcaatcccggcgcgcagcggcgcatcgtgctggccaccaacgtggcc
gagacctcgctgaccgtgccgcgcatccgctacgtggtcgatcccggcctggcgcgggtc
aagcgctacagcccgcggcagaagctggaccgcctgcacatcgagccggtcagccaggcc
agcgccaaccagcgcatgggccgctgcggccgcgtggccgaaggcatctgcgtgcgcctg
tacgcgcaggccgatttcgaggcgcgtccgcgctatacggacccggagatccggcgttcc
tcgctggccggcgtgatcctgcgcatgctgcagctgggcttgggccggatcgaggatttc
ccgttcctggaggcgccggacgagcgcgccatcgccgatggctggcagcagctggtcgag
ctgggcgcggtcaccgaggccgaccgccacggcctgcgcaagctgaccgaggtcggccgg
cgcatggcgcgcctgccggtggacgtgaagctggcgcgcatgctggtcgccgcgcaggcg
cacggctgcctgcggccgatgctggtgatcgccgcgttcctggggatccaggatccgcgc
gagcgcccgcccgaggcgcgcgaggcggcagacaacgcgcatgccaagttcgccgatgcg
cgctcggagttcgtcggcatcctgcggctgtgggacggctatgcgcaggcgcacgaggag
ctgacccagtccaagctgcgcgactggtgcgggcgccacttcctgggcttcctgcgcatg
cgcgagtggcgcgagctgcatcgccagctgcgggtgctgtgcgaggagctgggctgggcc
gaagaaccggccgccgccgcgatggcgccactgctggccggctcgcccgccgcgccggtg
ggccaggacggcaagcccgcctcgcggcccacgcgcggcgaactgcatcgcgccgcgcgc
ctggcgcgcgagggcaaggcctcgctgccgggcgcagcgccggcccaggccgcgcctgcg
cctgcggcgcaggacgacagcgcgccgcggatcagcgagcgcgagcgcagcgcggcctac
cagtcgctgcaccgcgcgctgatcgccggcctgccgacccaggtcgggcatcgcaccgag
aagggcgatttcctggccccgcgccagcgccggttccatctgttccccggctcggccctg
gccaagaagccgccggcctgggtgctgaccgccacgctgctggacacccagcgcgtgtgg
ggcctgaccaacgcggcgatcgagccggactgggtgatcgccgaggtgccgcagctgctg
gcgcgcaagcacttcgacccgcactggtcgcgtgcgcaggggcaggtgctggcctccgag
cagatcagcctgttcggcctggtgctggcgccgaagaagccggtccactatggccgcatc
gcgccgcaggaggcgcatgaactgttcgtgcgccaggggctggtgccgggcgagatcaac
acgcgcgcctcgttcgtcgccgacaacggcaaggtgctggccgccgcgcacgaggaagag
gccaagctgcgccgcgccggcatcgtcgccgacgaggactggcaggcgcggtggtatctg
gaccgcatcccgggcgaactgcattcggccgcaggcctggatgcctggtggaagacgctg
cccgacgacaagcgcggccggctgcgctggtcgctggccgatctgctgcccggcgagggc
agcgaggccgatcgctatccgaagtatttcgcgctgggcgatgcgcgcctgccgctgcac
tacaccttcgagccgggcgcggaggacgacggcgtcaccctcgaggtgccgctgcatctg
ctgaacgccctggatgcggcgcggctgtcgtggctggcgccgggcttcgtcgcggagaag
gcggccgcgctgatccgcacgctgcccaaggcgcagcggcgcaacttcgtgccggcgccg
gacttcggccgtgcgttcttcgaggcgcatcgcaagccctccggcgacgatctgcgcggc
gagctggcgcgcttcctggccaaggccaccggcgtggcggtgagcgcgctggatttcgac
gaagccgcgctggagccgcatctgcgcatgcacctgcgcctgcgcgacgagcagggcaag
gtgctggcgtcttcgcgcgatctggaggcgctgcgcgaacgcttcggcacgcaggccggc
catgccttcgccgcgcgcgccggacgtgcgctggccagcgagggcctgcacgccttcccg
cacgacccgatcccgctgcaggtgcccggcgaagccggcgtgccggcgtatccggcgctg
gtggacgagggcgacagcgccgcgctgcgcatcttcgccgaccgcgcgcaggccgccgcc
gcacatccccgcggcgtgcggcgcctgctggagctggcgctggccgacaaggtcaagcag
gcgcgcaagcagctgccggtctcgcccaagaccgggctgctgtatgcggctatcgagtcg
caggagcgcctgcgcggcgatatcgtcgatgcggccctcaacgcggtgctggccgagggc
ctgggcgagatccgcgacccgggcagcttcgcccagcgccgcgatgcggccggcaaggcg
ctgttcggcgaggcgatggagcggctcaagctggccgaggcgatcctggccggcgtggcc
gaactcaagcccgagctggaggcgccgctgatgggctgggcgcgcggcaacctggacgat
ctgaccgcccagctggccgcgctggtgcatccgggcttcctgcgcgacacgccggcgccg
gcgctgtcccagttcccgcggtatctcaaggcgatgaagctgcgcgccgagcgggccaag
cgcgatcccacccgcgaccagcagcgcatgctggagctggtgccgttcatgcaggcgctg
gaggatgccgccgcgctgggccgcgccgcctcggacgactggcaggcgctgcgctgggat
ctggaggaactgcgcgtgtcgctgttcgcccaggagctgggcgcgcgcagcggcgtcagc
ccgaagaagctggcccagcgcgtggccgccctccaggggcgctga
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integrated database retrieval system
