Pleurodeles waltl (Iberian ribbed newt): 138245617
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Entry
138245617 CDS
T10800
Symbol
RARS1
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic isoform X1
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
138245617 (RARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pwl01007
]
138245617 (RARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pwl03016
]
138245617 (RARS1)
03029 Mitochondrial biogenesis [BR:
pwl03029
]
138245617 (RARS1)
Enzymes [BR:
pwl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
138245617 (RARS1)
Amino acid related enzymes [BR:
pwl01007
]
Aminoacyl-tRNA synthetase
Class I (G)
138245617 (RARS1)
Transfer RNA biogenesis [BR:
pwl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
138245617 (RARS1)
Prokaryotic type
Other AARSs
138245617 (RARS1)
Mitochondrial biogenesis [BR:
pwl03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
138245617 (RARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
Cnn_1N
tRNA-synt_1
tRNA-synt_1e
tRNA-synt_1g
YabA
Motif
Other DBs
NCBI-GeneID:
138245617
NCBI-ProteinID:
XP_069055449
LinkDB
All DBs
Position
7:complement(811675798..811905837)
Genome browser
AA seq
659 aa
AA seq
DB search
MDVQVSEYRARLQQQEIEIKSLAAEVENLKNVSHLGVSLNLEDLQEENTKLKYRLNILRK
SLQEERNKPTKSMININSRLQVIFGDAIKAAYPELENPPLVVTSSQQPKFGDYQCNSVMS
ITQMLKTSQKKVNPRDIADHIVRNIPSNEYIEKVEIAGPGFINVHLKKDFVSKQLKSLLL
NGVQPPTVGDKKKVIVDFSSPNIAKEMHVGHLRSTIIGDSICRLFEFVGHDVLRLNHVGD
WGTQFGMLIAHLQDKFPDYVTVSPPIGDLQSLYKESKTRFDQEEDFKKRAYQCVVDLQSK
RPDIIKAWNLICDVSREEFQKIYDCLEIKLIERGESFYQDRMDAVVKEFEAKGLVQFDEG
RKIVFPPGCTVPLTIVKSDGGYTYDTSDLAALKQRLFEEKGNILIYVVDSGQSIHLQNIF
AAGQLIGWYDPKVTRVEHAGFGVVLGEDKKKFKTRSGETVRLIDLLQEGLKRSMDKLKDK
ERDKVLTAEELKAAQESVAFGCVKYADLSHNRMNDYIFSFDKMLDDRGNTAAYLLYAFTR
IRSIARLANVDEKMLREAAEKEIVLDHEKEWKLGKCILRFPEILQKILDDLLLHTLCDYL
YELATTFTEFYDNCYCVEKDRQTGEIVKINMGRMLLCEATAAIMEKGFSVLGIKPVQRM
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggatgttcaggtgtctgagtacagagctagactgcagcagcaggaaatagagatcaag
tctctggctgctgaagtagagaacctgaaaaacgttagccatctaggagtttctctgaat
ctggaagacctgcaggaagaaaacacaaaattgaaataccgtctaaatatactccgcaag
agtcttcaggaggagagaaataaacccaccaaaagcatgattaacatcaactcgcgcctg
caggtgatatttggagatgctattaaagcagcctatccggagctggaaaatcctcctctt
gttgtcacttcaagccagcagcctaaattcggagattaccaatgtaacagtgtcatgagc
ataacacagatgttgaaaaccagtcagaagaaagttaatccaagagatattgcggaccac
attgtccgaaatattcccagtaatgagtatatcgagaaagtggaaattgcaggcccaggg
ttcattaatgtgcatttaaagaaagactttgtatccaagcagctgaagagcttgttgttg
aatggagttcagccacctacagttggagacaagaaaaaggttattgttgacttctcttcc
ccaaatatcgccaaagaaatgcatgtaggccacctgcggtctactatcattggagacagt
atatgccgtttgttcgagtttgtgggccatgatgttctacggttaaaccacgtaggagat
tggggaacccaatttggcatgctgattgctcaccttcaggataaattccctgattacgtg
actgtgtcccctcccataggagatctccagtctctttacaaagaatctaaaaccaggttt
gaccaggaggaagactttaagaaacgggcataccagtgtgtggtggatttgcagagcaaa
cgcccagacatcataaaagcatggaatctgatctgtgatgtatctcgagaagagttccag
aaaatctatgactgcctggaaatcaagcttattgaaaggggagagtcattttaccaggac
agaatggatgctgttgttaaagaatttgaagctaaagggcttgttcagtttgacgaaggg
cgcaagattgtatttcccccaggatgcacagttcctttaacaatcgtgaaatctgatgga
gggtacacatatgatacatcagatcttgctgccctcaagcaaaggctgttcgaggagaag
ggtaacattctcatctatgtggttgacagtggacagtcaatacatcttcagaatattttt
gcagcaggccagttgattggctggtatgatcccaaagtgaccagagtagaacatgcagga
tttggagtggtcctgggagaagacaagaagaagtttaaaactcggtccggggaaactgtg
cgcctcatagacctgctgcaagaaggactgaaacgatcaatggacaaactgaaggacaaa
gagagagataaggttttaacagcagaagaactgaaagctgcccaggaatctgttgcattt
ggctgcgtgaaatacgcagacctctctcacaaccgaatgaatgactacatcttctccttc
gataaaatgttggatgatcgtgggaatacagcggcatatctgctatatgccttcaccaga
atcaggagtattgcacgacttgcaaatgtggatgagaagatgctgcgtgaagctgctgag
aaggagatcgttttggaccacgagaaggaatggaagttaggcaagtgtatcttacggttc
ccggagatactacagaagatcctggacgaccttcttcttcacacgctgtgtgattacctt
tatgagctggccaccacgttcacagagttttatgacaactgctattgtgtggaaaaggac
cggcaaactggtgagattgtaaagatcaacatggggagaatgcttttatgtgaggcaaca
gctgctattatggagaagggcttcagtgttcttggaatcaaacctgttcagaggatgtaa
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