Pleurodeles waltl (Iberian ribbed newt): 138245694
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Entry
138245694 CDS
T10800
Symbol
RNF130
Name
(RefSeq) E3 ubiquitin-protein ligase RNF130 isoform X1
KO
K15701
E3 ubiquitin-protein ligase RNF130 [EC:
2.3.2.27
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pwl04121
]
138245694 (RNF130)
Enzymes [BR:
pwl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138245694 (RNF130)
Ubiquitin system [BR:
pwl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138245694 (RNF130)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
DUF7027
PspB
Prok-RING_4
zf-RING_16
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
138245694
NCBI-ProteinID:
XP_069055613
LinkDB
All DBs
Position
7:complement(902195365..902711226)
Genome browser
AA seq
427 aa
AA seq
DB search
MNLRFLLRPSYCLLPACLLWMLFGIPLARAENPNVEYYNAVVNVTLLFPGGSPMHLRIDG
RYGLDSPKIETKGVVLAPLPIHGVADRLGCDPQTRFHVPPNTKLWIALLQRGNCTFKEKI
LRAASHNATAVVIYDNVTKDEAVTMTHQGTGDIVAIMITEAKGKEIMSYVERNISVLMAI
AVGARSTSSKTFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTSARDRNQRRLGDAA
KKAIGKLTTRTVRKGDKETNPDFDHCAVCIESYKQNDVVRVLPCKHVFHKGCVDPWLSEH
CTCPMCKLNILKALGIVASVPCTDHVAFDMERLGRGPSANRRLGPGELANDSSLSLEPLH
STGMSQLPQDGELTPRTGEISIAVTKEWFIIASFGLLSALTLCYMIIKATAGLNAPEAYI
HCEDSFP
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgaggtttcttctacgcccttcgtactgcctcttgcctgcgtgcctgctgtgg
atgttattcggtatccccctggcaagagcagagaacccgaatgtggaatattacaacgct
gtggtgaatgtgaccctcttgttcccagggggtagtcccatgcatttgaggattgatgga
cgctatggactagactcgcccaagattgagaccaaaggcgtggtattggcaccactgccc
atccatggagtggcagatcggttgggttgtgacccacaaacgcgcttccatgtgccaccg
aacacaaaactctggattgcattactgcagcgtggaaactgcacatttaaagagaagatt
ctgcgagcagcttcccacaatgctacagctgtagtcatctacgacaacgtcacaaaagat
gaggcagtaaccatgacccaccaaggaaccggtgatattgttgctatcatgatcacggaa
gcgaagggcaaggaaatcatgagctacgtagaaaggaacatctctgtgctcatggccatt
gctgtcggcgcacgaagcacctccagcaagaccttcagccgaggctccttggtgtttgtc
tccatctccttcattgtgctgatgatcatctcctctgcatggcttattttctacttcatc
cagaagattagatatacaagtgcccgggaccgcaaccagcgccgcttgggagatgcagca
aaaaaagccattgggaagttgaccacaagaacagtcaggaagggagacaaggaaacaaac
cccgactttgatcactgtgccgtttgcatcgagagctacaaacagaatgatgtggtccgc
gttttgccatgcaagcatgttttccacaaaggctgcgtcgacccgtggctcagcgagcac
tgcacttgtccaatgtgtaagctgaacatcctgaaggccttgggaatagtggctagtgta
ccatgtacagaccacgtggccttcgacatggaaagactggggagaggaccatcagccaat
cgaagattgggaccaggggagttagccaatgacagttctctcagcctggagccgctgcac
tcaacaggcatgtcgcagcttcctcaggatggagagctcaccccgcggacaggagaaata
agcattgctgtgacaaaagagtggttcattattgccagctttggtctgctcagcgcactt
actctctgctacatgatcatcaaggccacggctggcttgaatgctcctgaggcgtacata
cactgtgaagactcctttccatag
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