Pleurodeles waltl (Iberian ribbed newt): 138245719
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Entry
138245719 CDS
T10800
Name
(RefSeq) protocadherin alpha-13-like
KO
K16499
protocadherin delta 2
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pwl04515
]
138245719
Cell adhesion molecules [BR:
pwl04515
]
Cadherins
Protocadherins
138245719
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
MP_p6
Motif
Other DBs
NCBI-GeneID:
138245719
NCBI-ProteinID:
XP_069055668
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Position
7:868010095..868012569
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AA seq
806 aa
AA seq
DB search
MGFAVRRWFLPWISVFTCSLLWCRGRAEGPIRYTALEESEAGAEVGNVARDLGVDVRDLH
LRNVRLTYESDVQYFTVSMESGTLLTKEILDREALCGSIGVCVMNLEVVMDNPLEFHRLE
IEIVDINDNAPFFPTSETRFTITELTLPGTHFPLRRANDPDVGTNSQCSYRLSRSDFFTL
NTKVSDYKSASVDLVLNKPLDREQQAVHELTLTAVDGGTPTRSGTSHITIRVLDANDNPP
VFDKDGYRISVLENTAAGTVLMKLNATDIDEGANGEIVYSFGSHEFLEVRKMFSVDTENG
EIRAVGYLDYEESNVYELHVQAQDKAPLPMTAHSKVLVEIIDVNDNAPEIRVTSFSSPVK
EDAQPGQVIALFTVTDKDSGVNAQVRCQIGNELPFVINSKYQNFYSLSVKKPLDREATSM
YNVTVLATDGGSPSLSTMKTIVVSVSDVNDNAPAFSELSYVTSVPENNVPGSHVLQVLAL
DPDTGDNARVRYSLIENSVDTVSILSLFSVHPETGVISALQPFDHEKFQVVQFWIEAKDC
GSPTMSGIANMTVFIQDANDNPPTIIQTGSRSAGSGDVLVPRSSNAGHIVSKIRAVDSDS
GHNAWLSYEFIDSTMGVLFKIGLHTGEISLRHPLGESYLERRELFILVKDHGTPPLSATA
TLTISLVETAPEVISDYKHVDKKDGYLTNLNSYLIISIAFISGIFIFCIILFVALRYLEV
RNEYGMKEKTELCPDGEGNWLYSQTQQDSSYLTAQPAHCDNGTLKSNPPHEGWTHVIFNG
GKPGDLIQRYSITVGNNSQAPSEVRE
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgggttttgcagtcagacgctggtttcttccctggatttctgttttcacgtgttcgctc
ctttggtgccgaggacgggccgagggaccgattcgctacacggcgctggaggagtcggaa
gccggcgccgaggtggggaatgtggcgcgggacctgggtgtggacgtgagggatctgcac
ttaaggaacgtgcggctgacatatgaatctgatgtgcagtatttcacggtaagtatggag
agcgggactttactgactaaagaaatactggacagggaagccctgtgcggcagcatcggc
gtctgtgtgatgaacctggaggtcgtgatggacaatcctttggaatttcaccgcctggag
atagaaatcgtggatattaatgacaatgcgccctttttcccaactagtgaaacccggttt
acgattaccgagttaacccttccggggactcattttccactgaggagagcgaatgaccct
gatgtcggtacgaactctcagtgctcgtacagactaagccgcagtgattttttcactctg
aatacgaaggtcagtgattataaaagcgcgtctgtggatttggtgctgaacaaacccttg
gatcgggagcaacaggcagtgcacgagctgaccctcacagctgtggacgggggaacccca
acgaggtcggggacttctcacataactatcagggttctggatgcgaatgacaaccctcct
gtgtttgataaagacggttacaggatcagtgtgctggaaaatacagctgcaggtactgtg
ctgatgaagctaaatgctaccgacatagacgaaggcgcaaacggagaaattgtgtattcc
tttggcagccacgaattcctcgaggtaagaaagatgttttctgttgatacagagaatggt
gaaattcgagcagttggatacctggactatgaggagtctaatgtgtatgagctccacgtg
caggcgcaggacaaggcccccctgcccatgaccgctcactccaaggtattggtagaaata
attgatgtcaacgacaacgccccggagataagagttacttctttttccagcccagtaaaa
gaggacgctcagcccggacaggtcattgccctctttacagtcacagataaagattctgga
gtgaatgcacaggtacgttgccaaattggaaatgagcttccatttgtgattaattccaaa
tatcaaaacttctattcactgtctgtgaaaaaacctctagaccgtgaggcaacttctatg
tacaatgtcactgttcttgccacggatgggggatcgccttcattgtctaccatgaagaca
attgtggtttctgtgtcagatgtgaatgacaacgctccagccttttcagagttgtcttat
gtgactagtgttccggaaaataacgtgcccggatctcacgttctccaagtcttggctctg
gacccagacaccggtgacaatgctcgggttagatattccctgatagaaaacagcgtggac
actgtttctattctcagcctcttctctgttcacccagagactggggtcatttctgctttg
cagccttttgatcatgagaagttccaggtagtgcagttctggattgaagcaaaggattgt
gggtctcctaccatgagtggaattgcaaacatgacagtgtttattcaagatgcaaatgac
aatccaccaaccataatccagactggatccaggagcgctggatcaggtgatgtgctggtg
cctcgctcatcgaacgctggtcacattgtgtctaaaatcagagcagttgattcagactct
ggacacaatgcctggctctcctacgaatttattgactccacaatgggggtgcttttcaag
atcggtcttcatactggagaaatcagtctgagacacccgctgggagagagttaccttgaa
agacgagagcttttcattctggtgaaggatcatgggaccccgcctctttcagcaacagcg
actcttacaatatcactggtagaaactgcaccagaagtgatatcagactacaagcacgtg
gacaagaaggatggctaccttactaacctgaactcgtatttaattatctctattgccttc
atttctggcattttcatattttgcattatactttttgttgctttacgttacttagaagtt
cgaaatgaatatggaatgaaagaaaaaacagagctttgtcctgatggtgaaggaaattgg
ttatattcacaaacacagcaggacagttcttatctgactgcacagcccgcgcactgtgac
aatggaacactgaaatctaacccgccacatgaaggctggacccatgttattttcaacggg
ggtaaacctggagacctgatacagagatacagcattacagtgggaaacaacagccaggca
cctagtgaggtaagagagtaa
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