Pleurodeles waltl (Iberian ribbed newt): 138245862
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Entry
138245862 CDS
T10800
Symbol
ABCA5
Name
(RefSeq) cholesterol transporter ABCA5 isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
138245862 (ABCA5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pwl02000
]
138245862 (ABCA5)
Transporters [BR:
pwl02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
138245862 (ABCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
MMR_HSR1
AAA_23
ABC2_membrane
nSTAND3
Rad17
AAA_30
Baculo_F
Motif
Other DBs
NCBI-GeneID:
138245862
NCBI-ProteinID:
XP_069055940
LinkDB
All DBs
Position
7:1022352079..1023358258
Genome browser
AA seq
1641 aa
AA seq
DB search
MASVLVKDAKVWRQTKALLYKNYLVKCRTKKTSIQEILFPLFLLLLLMFLSLMHPNKHYN
AMPSTILGSLHEYLTSDLTLGYMPVNNLTSRIMNLMYSDCLSRDIVIEEFASEEDMREAS
ISNQGKFVGLVFNDAMSYQLRFFPDSVPASVVFTDSRANCYSLECDAATYLHSEFTSFQA
CIDSSIIKLKTNYSVWDELKSTKVILMGEPAVMEIDTFPRAIILIYLVMAFSPFGYYVAA
HVVAEKEKKLKEFLKIMGLHDTAFWLSWVLLYSSFILIMSLLMAVIVTVFSPFPKSNYFL
IFALFFLYGISLIFFALMLTPFFKKAKHVGVVEFLATLVFGCIGLLIVLVEDFPKPYVWL
LSPFCHCTFLIGIAQVLHLEDYETGALFSNLKEGPCPLIITFIFLVVDSTIYLLLAIYLD
QVLPGEYGLRRSPLFFFKPSYWSKKRRYYSELDESTLNRNLSISEMAEPVSEEFQGKAAI
RITGVQKTFRKKDENVEALRGLSFDIYEGQITALLGHSGTGKTTLMNILCGLCPASDGGA
TIFGHKISEFEEMVEVRKMIGICPQTDILFDVLTVEENLSVFASVKGVDHRLIQQEVHKV
LQDLDMHAVKDNQAIKLSGGQKRKLSVGVAVLGNPKVLLLDEPTAGMDPCSRHVVWKLLK
HRKADRVTVLSTHFMDEADILADRKAVISQGMLKCIGSSLFLKTKWGVGYRLSLDINKIC
DVEAVTSLIRGHTAGSKLLQQHEHELVFTLPFKDMDKFSGLFSDLDGHSDLGVISYGVSM
TTLEDVFLKLEVEAEIDQADYSVFNQQHTEEDLDRKSLGEMEQSLLLLSESKANTVSSPA
LWRQQAATVARFHFLNLKRESKSVRVVLLLLLIFIAVQVFMFLVHRYFKSSVGPVKLSPD
LYFVMPGQKSNRLLTSLLVQNSTGSTIDDIINSLRSQKIAVELINGSDYIAISPHNAALN
VLYSEKSYTFEAVFNSTMVHSLPVLVNVISNLVLDSLNSTESIHVWSNPFFQEITETIFK
LELYFQAALLGIIVTGMPPYFAMENADCHKMKAYTQLKMAGLYPSAYWVGQAVVDLPLFF
LILVLMMGSLFAFHYGVYFYADKFVAVVFCLLGYVPAVILFTYTVSFTYKNVQNTQEFWS
FIFSVTALIAVVITEVTYFIGNDLITTVLHDLFSVFIPIYPLVGCLICFIKISWKGSQNH
ENHSSPWSRLFIAVISPYLQCLLLLFLLRYLEMKNNGRATRVDPLFRTCTKKTKPLRFSE
VPNDEDDDVQAERARVGEMITCKNCEEKPAILVCGLYKEYDEKRHFFLGRKIKKWTTNNV
SLSVKKGEILGLLGPNGAGKSTFINMLVGDTDPTAGQVLMGEYSQTEGNNPVNFVGYCPQ
TNPLWPEITLQEHLEIFGSIKGMTASDLKDVIKRVTSALDLKEHLQKPSKKLSAGIKRKL
CFALSMLGNPHIVLLDEPSTGMDPKAKQQMWRAIRTAFKSKERSAILTTHYMEEADAVCD
RVAIMVSGQLRCIGSVQHLKSKFGRKYFLDMKLREVSESQKVELLHREIEHIFPHASRQE
SFASILSYKIPREDVQSLSLAFSRLEEAKHAFDIEEYSFSQSTLEQVFVEFAKEQEVEED
DFATLNSTLWWERRQEDRVIF
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgttttggttaaagatgcaaaagtctggcgacagaccaaagctctcctgtac
aagaactacctggttaagtgcaggaccaagaagaccagcatacaggaaatccttttcccg
ctatttttgctccttttgttaatgtttctaagtttaatgcatccaaataaacattataat
gcaatgcccagcacaatacttggatccctgcatgaatatttgacgtcggacctcactctc
gggtacatgccggtgaacaacttgactagcagaatcatgaatttgatgtactctgactgt
ttatcaagggacattgtcatagaggaatttgccagtgaagaagatatgcgggaggccagc
atttccaatcaaggaaaatttgtcggtcttgttttcaatgatgccatgtcatatcagctc
aggttctttccagattctgttccagcctccgttgttttcactgactctcgagccaactgt
tactccctggaatgtgatgctgctacgtatttgcattcagagttcacaagctttcaagcc
tgcattgattcttctattataaagttaaaaacaaattattcagtttgggatgaactgaag
tcaacaaaagttatactcatgggagagcctgcagtgatggaaatcgatacttttccaagg
gctatcattttaatttacctagttatggccttttccccatttggatattacgttgcggcc
catgttgtagcagagaaggagaagaagttgaaagaatttttaaaaattatgggactacac
gacactgccttctggctctcctgggttttgctgtattcaagctttattttgatcatgtca
ctactcatggctgtcattgtgaccgtgttctcacctttcccaaaaagcaactactttttg
atatttgctttattttttctatatggtatatcattaatattttttgccttaatgctgact
cctttctttaaaaaagcaaaacatgtgggagtggttgagttccttgcaacactggtcttt
ggatgcattggtcttcttattgtactggtggaagatttccccaaaccatatgtgtggcta
ctgagccccttctgccactgcacattcctcattggcattgcacaggtcttgcatctggaa
gattatgaaactggagccctcttttcgaacttaaaagagggaccatgtcctctgattatc
acatttatttttctggtagtggatagcacaatatacctgcttcttgctatctatctggat
caagttttgccaggcgagtatgggctccgacgatcacctttattcttttttaagccttcc
tactggtcaaagaaaagaagatattacagtgaactggacgagagtactttgaacagaaat
ctaagcatcagtgaaatggctgaaccagtatctgaagaatttcagggaaaggcagctatc
agaatcactggtgttcaaaagactttcagaaagaaggatgagaatgtggaagctctgaga
ggcttgtcttttgacatatacgagggacagattacagctctactgggtcatagtggcacg
ggtaaaaccacgctaatgaacatcctctgcggtctatgcccggcctccgatggtggtgcc
accatttttgggcacaaaatctctgaatttgaagagatggtagaagtgagaaagatgatc
ggcatctgtccacagacagatatactattcgatgttctcacagtggaagagaatctttct
gtttttgcttcggttaaaggtgtagaccacagactcattcaacaggaggtgcacaaagtt
ctgcaagacttggatatgcatgcagtgaaagacaaccaggcaatcaaattgagtggggga
cagaaaaggaaattgtctgtgggagttgccgttctaggaaatcccaaggtattactccta
gatgaacctacagctggcatggatccctgctcacgacatgtagtgtggaaacttttgaaa
catcgaaaagctgaccgtgtgacagtccttagtacccatttcatggatgaagcagatatt
cttgctgatcggaaagcagtgatttcacaagggatgcttaaatgcattggatcctcactt
tttctcaagactaaatggggtgttggataccgcctgagtttagatatcaacaaaatttgt
gacgtggaggctgttacatcactgatcagaggacacactgctgggtctaaactgttacaa
caacacgaacatgaacttgtcttcactctgcctttcaaagacatggacaagttttcaggt
ctattttcagatctggatggccatagtgaccttggagtcattagttatggagtctcaatg
accaccttggaggatgtcttcctgaagttggaagtcgaggcagaaattgatcaagcagat
tatagtgtttttaatcagcaacacacagaggaagacttggacaggaaatcacttggggaa
atggagcagagtcttcttttgctgtctgaaagcaaggccaatactgtgagcagcccagcg
ctctggaggcaacaggcagcaaccgtagcccgttttcacttcctcaatttaaagcgggaa
agtaaatctgttagagttgtattgttgcttcttttaatttttatagccgtccaggttttt
atgtttttggtacatcgctacttcaaaagctcagtggggcctgtgaaactctcccctgat
ctttattttgtgatgcctggacagaagagcaacaggttgttaacgagtctacttgtccaa
aactccacagggtctactatcgatgacatcattaattcacttagaagtcagaaaattgca
gtggaattaattaatggaagtgattacattgccatctccccgcacaatgcagctttaaat
gtcctctactcagaaaagtcttatacctttgaagctgtattcaacagtaccatggttcac
tcgttgccagtgttagtgaacgtcatcagcaatcttgtgcttgacagcctaaatagcacg
gagtccattcatgtctggagcaaccctttctttcaagaaatcacagagaccattttcaaa
cttgaattgtattttcaagcagcactgctgggaattattgtaacaggaatgcccccttac
tttgccatggaaaatgcagactgccataagatgaaagcttacacccaattaaaaatggca
ggcctctatccttctgcctactgggtaggccaagcagttgtggaccttcctttgtttttc
ttgatactagttttgatgatgggaagcttgtttgcctttcactatggagtatatttctac
gctgacaaatttgttgctgtggtattttgccttcttggctatgttccagctgtaatcctg
ttcacttatacagtgtctttcacctataaaaacgtgcagaacactcaggagttttggtca
ttcatcttttctgtgacagctttgattgcagtggtcatcactgaagtgacctacttcatt
ggaaatgatttgataactactgttctacatgacctgttttctgtcttcatcccgatctac
ccccttgtgggatgccttatttgctttataaagatatcatggaaaggttcgcaaaaccat
gagaaccattccagtccctggagcagactcttcattgctgtgatatcgccttatttgcag
tgtttattgttgctgttcctcctgcgctatttggagatgaagaataatggaagagctact
agggttgaccctttgttcagaacctgtactaagaagacaaagccattgcgattttctgaa
gtaccaaatgatgaagatgatgacgtccaagcagaaagggcaagggttggtgagatgatc
acatgcaaaaactgtgaagagaaacctgcaattctagtctgcggtttgtataaagaatac
gacgaaaaacgacatttttttcttggacgaaaaattaagaagtggacaacaaataatgtc
tctctttctgtaaaaaaaggagaaatactgggacttttggggccgaatggagctggcaag
agcacctttattaacatgttggtaggagacaccgatcccactgctggacaggtgctgatg
ggtgaatattcacagactgaaggcaacaatcctgtgaattttgttggctattgtccccaa
accaatcctctctggcctgaaattacactgcaagaacatcttgagatttttggatccatc
aaaggaatgactgcaagtgatctgaaggacgttataaaacgagtcactagtgcgcttgat
ctgaaagaacatctccaaaaaccttctaagaagttgtcggcaggaataaaaagaaagtta
tgttttgcactgagcatgctgggaaacccacatattgtgcttctggatgagccatcgact
ggcatggatcctaaggccaaacagcagatgtggcgagccataagaactgcttttaaaagc
aaagaacgatcggctattttaacaactcattatatggaggaggctgatgcagtgtgtgat
cgagtagctatcatggtatccggacaattaaggtgtattggctctgtccaacatctgaag
agtaaatttggaagaaagtatttcttggacatgaaactgagggaggtctctgaaagtcag
aaagtagagcttcttcaccgggagatcgagcacatcttcccgcatgcaagtcgtcaagaa
agttttgcatcgattctgtcatataaaattcccagagaagatgtgcagtctctctctctt
gcattctctaggctggaagaagctaaacacgcctttgatattgaagagtacagtttctct
cagtcaacactggagcaggtgtttgtggaattcgccaaggagcaagaggtggaagaggac
gattttgccactttaaacagcacactatggtgggaaagacgacaagaggatcgtgtaatt
ttttag
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