Pleurodeles waltl (Iberian ribbed newt): 138245868
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Entry
138245868 CDS
T10800
Symbol
WIPI1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1 isoform X1
KO
K17908
autophagy-related protein 18
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04136
Autophagy - other
pwl04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138245868 (WIPI1)
04136 Autophagy - other
138245868 (WIPI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pwl04131
]
138245868 (WIPI1)
03029 Mitochondrial biogenesis [BR:
pwl03029
]
138245868 (WIPI1)
Membrane trafficking [BR:
pwl04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
138245868 (WIPI1)
Mitochondrial biogenesis [BR:
pwl03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
138245868 (WIPI1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_IFT122_1st
BCAS3_WD40
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
WD40_Prp19
WD40
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_NWD2_C
Beta-prop_NOL10_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_Vps41
CPSF_A
EIF3I
Beta-prop_WDR19_2nd
Beta-prop_Aladin
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
138245868
NCBI-ProteinID:
XP_069055949
LinkDB
All DBs
Position
7:1028788165..1028976812
Genome browser
AA seq
449 aa
AA seq
DB search
MDPGQGVENSEVTGAAELLKCFSYNQDCTSLAVGTTTGYKLFSLGTVEQLEVVHKSDETP
EVYIVERLFSSSLVVVVSHIKPRQMNVYHFKKGTEICNYSYSSNILSIRLNRQRLIVCLE
ESIYVHNIKDMKLLKTLLETPRNPTGLCALSINHSNSYLAYPASSTTGEITLYDANNLNT
VCTIPAHDSPLAAITFNSTGSKLASASEKGTVIRVFSTPEGEKLYEFRRGMKRYVNISSL
VFSMDSQFLCASSNTETVHIFKLEQVAESSLDESPSWTGYMGKMLMAATNYLPTQVSDMM
NQDRAFATVRLNFSDQKNVCTLATIQKLPRVLVASSDGHLYIYNLDPQDGGECVLIKKHS
LCGSGKPEGNPENELRSPVPQSYAATVARPSLLPSSSSMPGYSEDGGMLRGEVIPEHEFA
AGPVRLDDENEFPPIHLCHGNQKSKVKPS
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggatcctggtcaaggagtggagaattccgaggtcaccggagccgcggagttgctcaaa
tgtttttcctataaccaggactgcacttcattggccgttggaaccacgactgggtacaaa
cttttctcactgggaacagtggaacagctggaagttgtccataaaagcgatgagactccg
gaggtgtacattgtggagaggctcttctccagcagcctggtagtggtggtcagccacatc
aagccccggcagatgaacgtctaccatttcaagaaaggcaccgagatctgcaattacagc
tattccagcaacatcctctccatacgactcaaccgtcagaggctgatcgtgtgtttggag
gaatcaatctacgtccataacatcaaagacatgaaactccttaaaacgctgcttgagact
cctcgaaacccaacgggactctgtgcactttctattaaccattccaactcctacttggcc
taccctgccagctcgaccacaggggagatcacactctacgatgccaacaatttgaacaca
gtgtgcacaatccccgctcacgacagtccgcttgctgcaatcaccttcaactccacaggg
tcgaaattagccagcgcctctgagaagggcacagtcatccgtgtcttctccacaccggaa
ggggaaaagttgtacgagttccggaggggaatgaagaggtatgtgaacatcagctcgttg
gtcttcagcatggactcgcagttcctttgtgcatccagtaacacagagactgtgcacatc
ttcaagctagaacaagttgctgagagcagcttggacgagtctccttcttggacaggatac
atgggtaagatgttaatggcggccaccaactacctcccgactcaagtttcagacatgatg
aatcaggatcgcgcctttgccacagttcgactaaacttctccgatcaaaagaacgtctgc
actttagccacgattcagaagttaccacgtgttttggttgcatcatctgatgggcatctc
tacatatataacctagaccctcaggatggaggagaatgtgtcttgatcaagaaacacagt
ctgtgtggctcaggaaagcctgaaggaaatccagaaaatgagctgcggtctcccgtacct
cagtcctatgctgcaaccgttgccaggccaagcctgctaccgtcgtcttcttcaatgcca
ggctactccgaagatggaggcatgttgcgcggagaggtgatcccagagcacgagtttgca
gctggacctgtgcgcttggacgacgagaatgaattcccacctatacatttgtgccacgga
aaccagaagtccaaagtgaagccatcatga
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