Pleurodeles waltl (Iberian ribbed newt): 138245889
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Entry
138245889 CDS
T10800
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
Messenger RNA biogenesis [BR:
pwl03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
138245889 (HELZ)
3'-5' decay
Other 3'-5' decay factors
138245889 (HELZ)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138245889
NCBI-ProteinID:
XP_069055993
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Position
7:complement(1044547347..1045960685)
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AA seq
1930 aa
AA seq
DB search
MADRRPENLCEQACESFRRQEYEVALKYCTETLLSLSQYASANSTEAGQAEMERIKIESL
LYRIASLLQLRNYDQADEDTRHVLGEGLAKGECSFHAVLYSLHLDGKLQMVSSALTTSLV
GESLNGMVTKDLIKLKTLLSGIETSTSKISSRYHGEDLEDGTQDGWLFRPPPRGVTSSEE
YTLCKRFLEQGLCRYGAQCTSAHSQEELEEWQKRYASRLMKLKQQNENKQCSGSYMENMI
EKWMNSLSPEKVLSEHLEGVRIEHQPELSVTVTSKKSHQTWMFTLACKPARILYRVALLY
DAHRPHFSIVSISTGDGTGQLQEVPESCQEWIEGKSTQNGMDHCLYKICIAFDTEIFGTF
RQTVVFDFGTEPVLMQRIMVDAASTEDLEYLMCARQQLLTTAKRWDYTSKTIVEFEPNET
TELERSLLIRYQIPLSADQLFTQSVLDKSLTKINYQSRLHDLLYIEEIAQYKEVSKFNIK
VQLQLVASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYVLPVVK
EKSGYTQGTKEKVYEAVIEEKTKDYIFLRLCRDCCEELKLKPDREMQVELQFQLNRLPLC
EMHYALDRIKDNSILFPDLTLTPPIPWSPNRQWDELLDPRLNAKQKEAVLAITTPLSIML
PPVLIIGPYGTGKTFTLAQAVKHILKQQDTSRVLICTHSNSAADLYIKDYLHPYVEAGNP
QARPLRVYFRNRWVKTVHPVVHQYCLISSTYSTFQMPQKEDLLRHRVVVVTLNTSQYLCQ
LDLEPGFFTHILLDEAAQAMECETIMPLALANKNTRLVLAGDHMQLSPFVYSEFARERNL
HVSLLDRLYEHYPVEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKEFYPL
TFFTARGEDVQEKNSTAFYNNAEVFEIVERVEELRRKWPVAWGKLDDSSIGVVTPYADQV
FRIRAELRKKRLSEVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKRKEQLLEDST
EDLDYGFLSNYKLLNTAITRAQSLVAVVGDPVALCSIGRCRKFWERFITICHDNESIHGI
TFEQIKSQLEALELKKTYVLNPLAPEFIPRALRQQHSANVNKQHQHSPEGKNHNHNQNEH
FQSDGHVQPNPSVLIGNPIRAFTPPLGPHPNLGKSPSPVQRIDPHTGTSYLYVPTVYGGN
MVMPVPFSVPWAGYQNRFTVDPRLVTHPAAMAYNMNLLQAHGRGSPIPYGVGHHSPVNVG
NQGTQQQPPVQDKEQQEHIRNGKVESSPGPEMNKLRTPEKKTPDLKQVDVEANVQNRSPE
SRSGAGFPNAKFHRKNNVNSRHLNVHLNPPHPQYTVPNRHFQNIGQLPRQSYPVQPHQQH
LSEQQNQMPPPQSQMVQQHNHLNQQPQQQPSQLSPAFQSAPNNSLFNTPITHRTHSPGLE
SKGSEHRQPPVLQDASTPLRPIQQPHPHLNSFLEDNCSVLPAGEALDRIHENVALETLRQ
QQQARLQQWNEHNAFLSQGNIAFSHHHPPHLQHLSQQTMGMPRPNWKLGNNPEDETEGGC
SRLQDFLRELSHREHSENRELGEMPPPQSRLLQYRQVQPRSPPALPSPSSNSSHSGHFPN
FTENSRDLEMPSTPVFQHLPQLYNSPYPMPSGHITSPPLKYLQPDGSWTYANLPHNHILQ
QAFHYNMPPWQHRPQQNHFVQMQNHQHPVGQEPFHPLSSRAVSASSLHSLEEYEPRGPGR
PPLYQRRISSSSVQACPEDLGTQQETLSQCKDLQDHSNQPPFNYSPPELWVNATSSVPYQ
NIPCNGSSRAVPPREMLVVSAQSKTGNPHEDHLKGENLQIQNSFNFNSLQHLGQFPPLMP
NKQLAGSSISGQPNASGNKPAMSYASALRAPPKPKPPPEQAKKNSDPLALFQELSLGSSS
GSSGFYSYFK
NT seq
5793 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagaagacctgagaatttatgtgaacaagcatgtgaatcatttagacgacaa
gaatacgaagtggccctaaagtactgcactgagacactcctttccctcagccagtatgcc
tccgctaattccacagaggctggccaagccgaaatggaacgcatcaaaattgagagcctt
ctttacagaattgcttctttattgcaacttaggaactatgatcaagctgatgaagacacg
aggcatgttctgggagagggcctggcgaagggagagtgctcttttcatgcggtgctctac
tccttgcacctggacgggaaactgcagatggtatccagtgcgcttacaacatcattggtg
ggagaatctttgaatggaatggtgactaaagatcttataaaactgaaaactcttctatct
ggaatagagacctcaactagtaaaatatcatctcgataccacggagaagatttagaagat
ggaactcaagatggttggctgttccgccctcctccacgaggggtcacaagcagtgaggag
tacacattatgcaaaagatttttggagcaaggactctgccggtatggggctcagtgtact
tcagcacattcccaagaagaacttgaagaatggcaaaaacggtatgcctcacgtttgatg
aaactaaagcagcaaaatgagaacaagcagtgttctggcagctacatggaaaatatgatt
gagaagtggatgaattcattatcccctgagaaagtgcttagtgaacatttagaaggtgta
agaatagagcaccaacctgagttgtctgtcacagttactagcaaaaagtctcatcaaacg
tggatgtttacccttgcttgtaagcctgcaagaatactctatagagtggctttgctgtat
gatgcccatcgtcctcattttagtattgtctccatttctactggagatggtactggacag
ttacaggaagttccagaaagttgccaagaatggattgaaggaaaaagtacccagaatgga
atggatcattgcttgtataaaatctgcatagctttcgacacagaaatttttgggactttt
cggcaaactgtggtgtttgactttgggacagaaccagtactgatgcaaagaataatggtt
gatgctgcttcaacagaagatctggaatatctgatgtgtgcaaggcagcagctgctaacc
acagccaagcgatgggattatacttccaagactattgttgagtttgagccaaatgaaact
actgaactagaaagaagccttcttatccgataccaaatccctctctcagctgaccagctt
tttacacagtctgttctggataaatccttgactaagatcaactatcagtcccgattgcat
gacctactatacattgaggaaatagcccagtataaagaagtcagcaagttcaacataaaa
gtgcagttgcagcttgtagcaagtttcatgctcactggtgtttctggaggtgcaaagtat
gcccaaaatggacaactgtttggtcgcttcaaactcactgaaacactttcagaagacact
ttggctgggcggctggtaatgaccaaagtcaacgctgtttatgttttacctgtcgttaaa
gagaaatcgggatacacccagggaaccaaagagaaagtttatgaagctgttattgaagag
aaaacaaaagattatatatttctgagactatgtcgtgattgctgtgaagaactgaagtta
aaacctgatagggaaatgcaggtggaacttcagtttcagcttaatcgcttacctctctgt
gaaatgcattatgccttggacagaataaaggacaacagcatcctctttccagatctgacg
ttgacacctcccataccatggagcccaaacagacagtgggatgaactactggaccctcgg
ctaaatgcaaaacagaaggaagcagttttggccattacaactccactttccataatgctg
cctcctgttcttataatcggtccctatgggacaggaaaaacatttactttagctcaggct
gttaagcacatactcaaacaacaggataccagcagagtacttatttgcacccattctaat
agtgcagctgacctttacataaaggactatttacatccctatgttgaagctggcaatccc
caggcaagacctctcagggtatatttcagaaaccgatgggtgaagactgtacacccagtc
gtgcatcaatactgtctgatttcaagcacatattccacgtttcagatgccccagaaagaa
gaccttctacgtcacagagtagtagttgttactttgaacacctcacagtatctttgtcaa
ctggatctggagcctggtttttttactcacatactgttggatgaggctgcacaagccatg
gaatgcgagaccatcatgcctctagctctggctaataaaaatacacgtcttgttctagct
ggagaccatatgcaactcagtccctttgtctacagtgaatttgcaagagagcgaaatctt
catgtctcattacttgaccggctatatgagcactaccctgtagagtttccatgtagaatc
cttttgtgtgagaactatcgctcccatgaagcaatcatcaattatacatctgaattgttt
tacgaaggaaagttgatggccagtggaaagcagccagcacacaaagaattctaccccttg
acttttttcacagcacgcggagaagatgtgcaagaaaaaaacagtacagccttttacaac
aatgcagaagtgttcgaaattgtagaacgtgttgaagaactgaggaggaaatggccagta
gcctggggcaaactagatgacagtagcattggggttgttacaccatatgctgatcaagtg
ttcagaattcgagcagagctacgaaaaaaaaggttatcagaagtcagtgtggaaagagtt
ctcaatgtccagggaaagcagtttcgtgttttattcctcagcacagtcaggacacgacac
acgtgcaaacataaacagaccccaatcaagaggaaggaacaactccttgaggattccaca
gaagacctagattatggttttttatcaaactacaaacttcttaacaccgctattacaagg
gctcagtctttagtggcagtagtgggggatccagtagctctttgttccattgggagatgc
aggaaattttgggagcgatttatcacgatatgccatgacaatgaaagcattcatggtatc
acatttgaacagatcaagtctcagttggaggctcttgaattgaagaaaacctatgttctt
aacccactggctccagaattcattccacgagcattaaggcagcagcattctgcaaatgtg
aacaagcagcaccagcattcaccagagggtaaaaaccataatcataaccagaatgagcat
tttcagtctgatggccatgttcaaccaaatccttcagtgctgattggcaatcctatccgg
gcatttactcctccccttggacctcacccaaacttgggcaaatctccgagccctgtacaa
aggatagatccacacactgggaccagttatctttatgtacctacagtttatggaggaaac
atggtcatgccagtgccgttttctgtaccatgggctggctatcagaataggtttactgta
gatcctcgacttgtgactcatccagctgcgatggcatacaacatgaacttattacaagcg
catggacggggatctcctattccttatggtgttgggcatcattcacctgttaatgttggg
aatcagggcacccagcagcagcctccagttcaggacaaagagcagcaggaacacattcga
aatggcaaagttgaaagcagtccagggcctgaaatgaataaacttcgaaccccagagaaa
aaaacaccagatttgaaacaggttgatgtggaagcaaatgtacagaacaggagccctgaa
tctcgttctggtgctggttttcccaatgcaaaatttcaccgcaaaaataatgttaattca
agacatttgaatgttcatcttaacccaccccatccacaatatacagtaccaaatcggcat
ttccaaaacattggccagctaccaaggcagtcctatccagtgcaacctcatcaacaacat
ttatctgagcagcaaaaccaaatgccacctcctcaaagccagatggtccagcagcataat
cacttaaaccagcaaccccaacaacaaccttcacagctttctccggctttccagtctgct
ccaaacaactcactttttaacacccccataacacatcggacacattcacctggattggaa
tccaagggttctgagcaccgtcaacctcctgtgctacaggatgccagtactccactgcga
cccattcaacagccccatcctcacttaaatagcttcttggaagacaactgttctgtactg
cctgcaggggaggctctggatcgcatacatgaaaatgtggctttggaaacattaaggcag
cagcagcaagcaaggttacaacagtggaatgagcataatgccttcctgagtcagggtaac
atagcgttttcacaccaccaccctcctcatttgcagcacctttcccagcaaacaatgggc
atgcctaggccgaattggaaacttggcaataatcccgaagatgagacagaaggaggatgt
tcaaggttacaagacttcctaagggaactgtcacatcgtgagcatagtgaaaaccgggaa
ctaggggaaatgccaccacctcaatcaagactgttgcaatacaggcaggtgcaacctaga
agtccaccagcactcccttctccttcatctaactccagtcatagtggccattttcccaac
ttcactgaaaacagcagagaccttgaaatgccaagcacaccagtgtttcagcatttgcct
cagctttacaattccccttatccaatgccatctggacacataacctcgcctcccctgaag
tatctacaacctgatggatcatggacatatgctaacctgccgcacaatcatatactacag
caggcttttcattataacatgcctccatggcagcacagaccacagcagaaccattttgta
caaatgcaaaatcatcaacatccagttggtcaggagccatttcatccactatcatctcga
gcagtatctgcttcttcgctccacagcctagaagagtatgaaccaagaggaccaggcagg
ccaccattgtaccaaagaagaatttcatctagctcggtccaggcgtgtcccgaagatcta
ggcactcagcaagaaactcttagtcaatgtaaagatcttcaggaccacagtaaccaacct
ccgttcaactattcaccccctgagttatgggtgaatgccacctcatctgtcccataccag
aacattccatgcaatggttccagcagagcagtgccacctagggaaatgttagttgtttca
gctcaatcgaagacaggaaacccccatgaggatcatttaaaaggtgaaaatctacagatt
caaaattccttcaacttcaactctctgcagcatcttggccagttcccacctctcatgccc
aacaagcagcttgcgggatccagcatcagtggccagccgaatgcgagcgggaacaagcct
gccatgtcctacgcaagtgccctgagggcaccaccaaagcccaagcccccacctgagcag
gcaaaaaagaatagtgatcctttagctctgtttcaggaacttagcttaggtagttcatca
ggtagcagcggcttttactcctattttaaataa
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integrated database retrieval system
