Pleurodeles waltl (Iberian ribbed newt): 138246010
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Entry
138246010 CDS
T10800
Symbol
TSEN54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54 isoform X1
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pwl03016
]
138246010 (TSEN54)
Transfer RNA biogenesis [BR:
pwl03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
138246010 (TSEN54)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
Motif
Other DBs
NCBI-GeneID:
138246010
NCBI-ProteinID:
XP_069056256
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Position
7:1130580485..1130783141
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AA seq
523 aa
AA seq
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MGSPHTPADMDRSSAKGLMRAAELFGARTREHSLPQRSHGQKDFINDHTEAQTEKLRQCR
EEQWLLLSEERVERLGSLVKAQWRPRRGFVELKSPAGKFWHTMGFTRRGKQCLQTEEAIY
LLECGSIQLFYRSLPMSIQEAYERLLPSKSTSLLQYQVFSHLKRLGYILMRFDPSTVLSS
YERQMNMEGTHRKSSGNRRKRKRSPSPRSQDKRGKTDENVPCGERAKEKTSESALVNQIM
PAVGSVNEHWPSHSTSPIQNLTNTANRCISDDGPCPISEPSTESRNFNCRSRWDFIEIMF
PNLASDCLHNHLPPPDVVLLPENIIGRELDMSSWRSRLNQTRERISRREQEQLEWESRYK
NSINADMEVKQCRSWREYKDLLRRRAQQGARQRPPHLWNQAVTPLIQPNQTTSTVSLLEQ
IGILHTSHILDGTAEIQNEAEEIKIDFDVYQADAVAEFKKSSPGKPYARMCVRRFDEEVP
DLRALKQLCRRSGDVPVVFALVDSGDIAFYSFKDFNLPVDVYP
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgccccatactcccgccgacatggaccgaagtagtgcaaaaggactgatgagg
gcagcagaactttttggagcgcggacccgggagcacagcctgccccagcgctcacatggg
cagaaggacttcatcaatgatcacactgaagcacagactgaaaaattacgtcagtgccgc
gaggaacagtggctgcttctgtctgaagagcgggtggaacgtctcggaagtttggtgaaa
gctcagtggcggccacgtagaggatttgtggagctgaagtctcctgcagggaaattttgg
cacaccatgggattcaccaggcgagggaagcagtgtctgcagacagaagaggccatctac
ttgctcgagtgtggctcaattcagctcttctaccgaagcctgcccatgtctatccaagaa
gcctatgagagactgctgcccagcaaatccacctccctcctgcagtaccaggtgttcagt
catttgaagaggctcggttacatcctgatgagatttgatcccagcactgtcctttcttcc
tatgagagacaaatgaatatggagggcacccaccgcaagtccagtggaaaccgccgcaaa
aggaaacgcagtcccagccccagatctcaagacaaaagaggaaaaaccgatgaaaatgtg
ccttgtggagagagggccaaagagaagacatctgaaagtgcacttgtcaaccaaataatg
ccagccgtaggcagcgttaatgaacattggcctagccatagcacatcaccaatccaaaac
ctcactaatacagcgaataggtgtatttcagatgatggtccctgtcccatttctgaaccc
tccaccgagagtcgaaacttcaactgcagatccagatgggattttatagaaattatgttt
cccaatcttgcctctgactgcttgcataaccaccttcctccgcctgatgtggttctcctg
ccagaaaacataattgggcgggaattggacatgtcttcttggcgcagtagactaaaccaa
actagagagaggatatccaggagagagcaggaacagctggagtgggagagccgctataag
aacagcatcaatgcagacatggaagtgaaacagtgtcgtagctggagggaatacaaggat
cttctgagaaggagggcgcagcagggagccagacagcggccaccccacctttggaatcaa
gcagttacaccgctgatacaacccaaccagactacatcaacagtttcccttctggagcag
atcggcattctgcacacttcccatatcctggatggaacagcagagattcaaaatgaagct
gaggagatcaagatagattttgatgtctaccaagcagatgctgtagcagaatttaagaaa
tccagtcctggtaaaccttatgccaggatgtgtgttcgtaggtttgatgaagaggttcca
gatctgcgggcactgaaacagctctgtcggcggagtggggatgtgcctgtcgtctttgca
cttgtggacagtggagacatcgctttttactccttcaaagactttaatctcccagttgat
gtatacccctaa
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