Pleurodeles waltl (Iberian ribbed newt): 138246105
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Entry
138246105 CDS
T10800
Symbol
TRIM16
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
Enzymes [BR:
pwl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138246105 (TRIM16)
Ubiquitin system [BR:
pwl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
138246105 (TRIM16)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138246105
NCBI-ProteinID:
XP_069056448
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Position
7:complement(1209533585..1209645936)
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AA seq
680 aa
AA seq
DB search
MAETVLSAQGLPKSSSARDLQTTVGTSASAEQEVTPAGSQEGNTENKNATSPKPDVTHDP
AAAVGSNPAADAPSETNGHAEVPGPDEGKTEDEDAVLCDFCLEEKVRATRSCLTCMVNYC
ESHLRPHVENIKLKSHRLVKPVRDADLRTCDAHNKLLRWFCQDDLMCACEECVAEQHSGH
AAVPCAEARKLKESELLQTVSEYEWKLKSAENAIVKLQANTTSIQNSVTEAKSAINVQFD
ELLQAVKKAHGHVLEFLEDKERAAVNQSNGIKIYLEQKCNEMEKRKLKAEKLAKHRNEIY
FLQEYSEFKKSTGDDSLPSVYIGLKDKLSGIRKVVTELTEHFIQNLQNSYKDKLQEFAKE
DDFGIKTTVSAIVPAMHRISAPEPKTRSDFLKYFSSLTLDLNTAHRYLRLLDDNRKVTNS
SPWQHPYPDHPDRFEHWRQVLCAESMYMGRHYFEVELKGENTHIGMTYKCIDRKGSESNS
TITGNNFSWTLKWNGKEFSAWHGDVETLLKSEKYSRVGVYLNYQRGTLSFYGVTSSMNLL
HKFESEFTEPLYPAFWLPKKENSVTIIGPEEGPGKSPVASPVSLVSSTETITTITTSSVA
DVLSSAILDPKTEILANTSIHTVRVETTTIHGSNVTISSSSSKKSSPVLEPSNVISDVSL
STTVSALPTDKPAAATIATV
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggctgagacggtcctaagcgcgcagggtctccccaaaagctcgagtgcaagagacctt
cagaccaccgtcggcaccagcgcatccgccgagcaagaagtgacccctgctggcagccaa
gaaggcaacaccgagaacaaaaatgcaaccagtcctaaacctgacgtgacccacgaccca
gccgcagctgtgggctccaaccccgctgctgacgccccgtccgagacgaatggccatgca
gaggtccctgggcccgacgaaggaaagacggaagatgaggacgcagtcctgtgcgacttc
tgcctagaagagaaagtccgggccactaggtcgtgcttgacttgcatggttaactactgc
gagagtcacctgcggcctcacgtggagaacatcaagctgaagtcccaccggctggtgaag
cccgtgcgcgacgccgacctgcgcacctgcgacgcgcacaacaagctgctccggtggttc
tgccaggacgacctcatgtgtgcctgtgaggagtgcgtggccgagcagcactcgggacac
gcggccgtcccatgcgccgaagcccggaagctgaaagagagtgagcttctccagacagta
tcggagtatgagtggaaactgaagtctgcagagaatgcgattgtaaagctgcaagccaac
accacatctatacagaactctgtgactgaagccaaatctgcaataaatgtgcagtttgat
gagctgctgcaggccgtcaagaaggcccacggccatgtgctggaatttctggaggacaaa
gagcgtgccgctgtcaatcaatcaaatggcatcaagatttacttggaacaaaagtgcaat
gagatggaaaagagaaaactcaaagctgagaaactggccaagcataggaacgaaatctat
tttctgcaggaatattccgaattcaagaaaagtacaggcgatgacagcctaccaagtgtt
tatattggcctgaaagataaactctctggaatcagaaaggttgtgactgagttaacagaa
cactttatccagaacctccagaactcctacaaggacaagctgcaggagtttgcaaaagaa
gatgattttggcataaaaacaacggtgtctgcaatcgtccccgccatgcatcgcatctca
gcaccggaaccaaaaaccagaagtgatttcctgaaatatttttcctcattgaccctggat
ctaaacacagcccaccggtatctccggcttttggatgacaatcgaaaggtaaccaactca
tctccctggcagcatccttaccctgatcatccagaccggtttgagcactggcgccaagtg
ttgtgtgctgaaagtatgtacatgggacgccattactttgaagtagagctaaaaggggag
aacacacatattggcatgacctacaaatgcattgaccggaaaggatctgagtcaaacagc
acaatcactggaaacaacttctcctggactttgaagtggaatggaaaagagttttctgct
tggcacggtgacgtggaaactctactgaagtccgaaaagtacagcagagttggagtttac
ctgaactatcaaagagggactttgtctttttatggggttaccagcagtatgaatttgtta
cacaagtttgaaagtgaatttactgagcctctctatcctgcattttggttgccgaagaaa
gaaaattcagtcaccattattgggccagaggaaggccctgggaagagcccggtggcttcc
ccagtatctctggtttcctctactgaaaccattactacaatcactacttcttcggtggct
gatgttctatcaagtgcaattctggatccaaaaacggaaatattggccaatacatcgatc
cacactgtaagagttgagacaacaacaattcatgggtctaatgttactatttcttcctct
tcctctaagaagtcgagtccagttctggaaccttccaatgttatatctgatgtctctctg
tcaacaacagttagtgccctcccaactgacaaaccggctgctgcaacaattgccacggtc
tag
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