Pleurodeles waltl (Iberian ribbed newt): 138246113
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Entry
138246113 CDS
T10800
Symbol
RAB40B
Name
(RefSeq) ras-related protein Rab-40B
KO
K07928
Ras-related protein Rab-40
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pwl04121
]
138246113 (RAB40B)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
pwl04031
]
138246113 (RAB40B)
Ubiquitin system [BR:
pwl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
138246113 (RAB40B)
GTP-binding proteins [BR:
pwl04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
138246113 (RAB40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
138246113
NCBI-ProteinID:
XP_069056459
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All DBs
Position
7:1217370474..1217660345
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AA seq
315 aa
AA seq
DB search
MFTHPLESGWLWPLRHLPQWAERNGLLAFFITFSLERMTHRGSPVKPYDFLLKFLLVGDS
DVGKGEILASLQDGATESPYGYNMGIDYKTTTILLDGRRIKLQLWDTSGQGRFCTIFRSY
SRGAQGVILVYDIANRWSFDGIDRWIKEIDEHAPGVPKILVGNRLHLAFKRQVSTEQAQA
YAERLGMTFFEVSPLCNFNITESFTELARIVLMRHGMDRLWRPNKVLNLQDLCCRAIVSC
TPVHLVDKLPLPVALRSHLKSFSMANGLNARMMHGRSYSLTANNSNKRNSLKKVKIIRPP
QSPPKDCTRNSCKIT
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgttcacacaccccctggaatcaggatggctgtggccattacgtcaccttccacagtgg
gctgaaagaaacgggctattagcatttttcattactttttctttggagaggatgacacac
cgaggaagcccagtgaaaccttacgatttcttgctcaagtttctgctggtcggagacagt
gatgtgggcaaaggggagattttggccagcctgcaagatggagccacggagtcaccctat
ggctacaacatgggtattgattacaagaccactacaatacttttggatggtcgtcgcata
aaattacaactttgggatacatcgggtcaaggaagattttgcactatctttcgttcttat
tccagaggagctcaaggtgtcatactggtgtacgatattgcgaatcgttggtcttttgat
ggaatagatcgttggatcaaggaaattgatgagcatgctccaggagtccctaaaattctg
gttggcaaccgcctccatctagcctttaaacgccaggtgtctacagagcaagcacaagcc
tatgcggagagattaggcatgactttctttgaagtaagcccgttgtgcaattttaacata
acagagtccttcacagaacttgcaaggatcgtacttatgaggcatgggatggaccgactt
tggaggccaaacaaagtactgaacttgcaagatctctgctgtcgcgctattgtttcttgt
acccctgttcatctggtcgacaagctcccgcttccggttgccttaagaagccatctcaag
tctttctccatggccaatggcctgaatgccaggatgatgcatggacgctcatattccctt
actgccaataacagtaacaaaaggaatagtttaaaaaaagtgaagatcatccgtccacca
cagagcccaccaaaagactgtacacgcaacagttgtaaaataacatag
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