Pleurodeles waltl (Iberian ribbed newt): 138246282
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Entry
138246282 CDS
T10800
Symbol
CNOT3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138246282 (CNOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwl03019
]
138246282 (CNOT3)
Messenger RNA biogenesis [BR:
pwl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138246282 (CNOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
138246282 (CNOT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF4407
Motif
Other DBs
NCBI-GeneID:
138246282
NCBI-ProteinID:
XP_069056823
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All DBs
Position
7:complement(1343390223..1344106095)
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AA seq
724 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKVSTPPSQLHNAANANQKEKYEADLKKEIK
KLQRLRDQIKTWVASNEIKDKRQLIENRKLIETQMERFKVVERETKTKAYSKEGLGLAQK
VDPAQKEKEDIGQWLTSTIDALNMGVDQFESEVESLSVQTRKKKGDKDQKQDRIEGLKRH
IEKHRYHIRMLETILRMLDNDSIVVDSIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLE
DIPQALVATSPPGHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKIRGRS
TDSEVSQSPAKNGSKGLHNHHPQSPAVTPSYQTGSSSSTSSSIGNGPGSNSNGAVSNSSG
NSSSSNKNPVSGHAPGTPTPYAQAVAPPSNTNTSQPRPPSAQQNSTKQNGATSYSSVVAE
HTSESALSSSTQSQSSQPIHHNPLPSTTKETSSASQSASSITSGPSLLLPLSVNPPSSPT
PSFSEAKPSQPLLNGPPQFSSTPEIKAPEPLSSLKSMAERAAISSNLEEPVTSAHLNDRD
LLITSTTSQPASSQPPMQLSEVNIPLSLGVCPLGPVPLTKEQQYQQDMELAAWHHMPHPS
DSERIRQYLPRNPCPTPPYHHQMPPPHSDTVEFYQRLSTETLFFIFYYLEGTKAQYLAAK
ALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLED
RDLQ
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaaagaaaattacaaggagagatcgatcgttgtttgaaaaaagtgtctgaa
ggagttgaacagtttgaagacatctggcagaaggtttccactcctccctcacagcttcac
aacgcagcgaacgcgaaccagaaggagaagtatgaggctgacctaaaaaaggaaatcaag
aaattgcagcggctgagggaccaaatcaagacgtgggttgcatcgaacgagattaaagac
aagaggcagctcatagagaaccggaagctaattgagacgcaaatggaaaggttcaaagtg
gtggagcgagagacgaagacgaaagcgtactcaaaggagggccttgggctagctcaaaag
gtggatcctgctcaaaaggagaaggaagatattggccagtggttaacgagcacaatagat
gcactgaacatgggggtggatcagtttgaaagtgaggtggagtcgctctcggtacagacg
cggaagaagaaaggagacaaagatcaaaagcaggacaggatagagggactgaaacggcac
atagagaagcaccggtaccacatacgaatgctagagaccatcctacgtatgttggacaat
gactccatagtggtggactcaatacgaaaaatcaaggatgatgtagagtactatgtggac
tcttcacaggacccagatttcgaagagaacgaattcttgtatgacgaccttgacctagaa
gacattccacaggcgctggtagctacttcacctcccgggcacagtcatatggaggatgag
attttcaaccaatctagtagcactcctacctccacaacgtcaagctcgccgattccgccc
agcccggccaattgtacaacggaaaattcagaggatgacaagaagattaggggcagatcg
actgacagtgaagtgagccagtcgcctgcaaagaacggttccaaaggcctacataaccat
catccacagtctccagctgtaacgccaagctatcagacaggaagcagctccagcacttca
tcttcaattgggaatgggcctggttcaaacagtaatggtgcagtgtctaatagcagtgga
aacagcagtagcagcaataagaaccccgtgtcgggacatgcgcctggcacgccgactcca
tacgcacaagctgttgcgccaccttccaacacaaacacttctcaaccacgaccacccagt
gcccagcagaattccaccaagcagaatggggcaacaagctatagctctgtggttgcggaa
catacttctgagtcagccctcagtagcagcacgcagtctcaaagcagccagccaatccat
cacaacccgctacccagcactacaaaggagacaagcagtgcctcccagtcagccagcagc
ataacatctgggcccagtttactgttacctttatcagtgaacccacccagctcccctacg
cccagcttcagtgaagccaagccgagccaacctctcttaaatgggcccccccaattcagc
tcaacacctgaaatcaaggctcctgagcccctcagctcactgaagtctatggcagagcga
gcagcaattagttccaatctggaagagccagtgacatctgcacacctcaatgaccgggat
ctactgatcacaagtacaacttctcagccagcctcaagtcagcctcccatgcaactctct
gaggtgaacatccccctctcgcttggtgtgtgtcccctaggcccagtgcctcttaccaag
gagcagcagtatcagcaagacatggagttggcagcctggcatcatatgcctcatccgtcg
gactccgagagaatacgacagtacctgccacgcaacccttgtccaacacccccttaccat
caccagatgccccctcctcattcggacactgtggagttctatcagcgactatcaacggag
acacttttctttatcttctattacctagagggtacgaaagcacagtatctggcagccaaa
gctctgaagaagcagtcttggaggtttcacaccaaatatatgatgtggttccagcggcac
gaagaacccaaaacgataactgatgagtttgaacaggggacttacatctattttgactat
gagaagtggggccagaggaagaaggaaggattcacctttgaataccgctacttggaggat
cgtgacttacagtga
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