Pleurodeles waltl (Iberian ribbed newt): 138246408
Help
Entry
138246408 CDS
T10800
Symbol
LRRC4B
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04514
Cell adhesion molecule (CAM) interaction
pwl04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
138246408 (LRRC4B)
04517 IgSF CAM signaling
138246408 (LRRC4B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pwl04515
]
138246408 (LRRC4B)
Cell adhesion molecules [BR:
pwl04515
]
Immunoglobulin superfamily
NGL family
138246408 (LRRC4B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_9
LRR_14
ig
V-set
Ig_2
VEGFR1-3_N_Ig-like
LRR_NXF1-5
LRRNT
DUF7617
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
138246408
NCBI-ProteinID:
XP_069057099
LinkDB
All DBs
Position
7:1397640231..1398680884
Genome browser
AA seq
642 aa
AA seq
DB search
MLTMAFHRFTRRIPVLKFIRMVWKQVLLIVWVSTLALAGTSPTSCPATCSCSNQASRVVC
TRRELVEVPESISINTRYLNLQENIIQVIKQDTFKHLRHLEILQLSKNLIGKIEVGAFNG
LPNLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIGSIPSYAFNRVPSLRRLDLGEL
KKLEFISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLEMIRPGSFQGL
VSLRKLWLMHAQIKIIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNP
WHCNCDVLWLSWWLKETVPSNTTCCARCHSPPNLKARYIGELDQSHFTCYAPVIVEPPTD
LNVTEGMAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTG
QYTCMVTNSAGNTTASATLNVSAADPTTTTPYSYFTTVTVETMETTQEEPKPTDKVLGPT
PSGGWDRTTTSLTPRSTGSTEKPYTIPITDVTGDTMKDLDDVMKTTKIIIGCFVAITFMA
AVMLIVFYKLRKQHQLHKHHGPTRTIEIINVEDEMPATNPGDNHMSLPAIEHDHLNHYTA
YKAHYNNNTGTLNCAKNPILNSIHEPLLFKSSSKENVQETQI
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgttgactatggccttccaccgctttacccgcaggataccagtgctgaagttcattagg
atggtttggaagcaggtcttgttaatcgtgtgggtgtcaacgctggctcttgctgggact
tcacctacctcttgcccagcaacttgttcttgcagcaaccaggccagccgagtggtctgt
acccgcagggaactagtggaggtaccagagagcatctcaatcaacaccaggtaccttaac
cttcaggagaacatcatccaggttattaagcaagacaccttcaagcacctgcgacatcta
gagatcctacagctcagcaagaacttgattggtaagattgaggtgggtgctttcaatggc
ctccctaacctcaacaccctggagctgtttgataatcgcttgactacagttcccacacaa
gcctttgagtacctctccaaactgagggaactgtggttgaggaataaccccatagggagt
ataccctcctatgcttttaatagagtgccctctctgaggcgactggacttgggtgagctg
aagaaattggagtttatctcagaagcagcctttgaaggtctggtcaacctgaggtatctc
aacctggggatgtgtaacttgaaggacatccctaacctaactgccctggttagactagag
gagctggagctttcaggcaaccgtctggaaatgatccgtccaggctccttccaggggctt
gttagcttgcggaaattatggttaatgcatgcccagataaaaataattgagcgcaatgct
tttgatgatctaaaatcactggaggaacttaacctttctcacaataacctcatgtcactt
cctcatgacctgtttacaccgcttcaccgcctggagcgggtgcacctcaaccacaaccct
tggcactgtaactgcgatgtgctgtggctgagctggtggttgaaagagacggtgccaagt
aacaccacctgctgtgcccgctgccattcaccaccaaacctaaaggctagatacattggg
gagttggaccagagccatttcacctgctatgcccctgtaattgtagaacctcctacagac
ctgaatgtcactgagggaatggctgctgagctgaagtgccggacgggcacctccatgaca
tcagtgaactggctgactccgaatggaactttgatgactcatggttcttacagagtgcgt
atctcagtgctacacgatggcacactcaactttaccaatgttactgtccaggacactggt
cagtacacttgcatggtcaccaattcagcagggaataccacagcctctgccacgctgaat
gtctctgctgctgaccctaccacaactaccccttattcctacttcaccacagttactgta
gagactatggagaccacccaagaggagccaaaaccaacagacaaagtgcttggacctaca
ccttctggtggctgggacaggacaacaacatctctaactccacgcagcactggatctact
gaaaaaccctacaccattcccatcaccgatgtcactggtgataccatgaaggacttggat
gatgtgatgaagaccacaaagattattattggctgttttgtggccataactttcatggca
gccgtcatgctcatcgtcttttacaagctccggaaacagcaccagttgcacaagcaccat
ggcccgacgaggaccattgagatcatcaatgttgaggacgagatgccggctaccaaccct
ggtgacaaccatatgtcgctgccagcaattgagcatgaccaccttaaccactacacggcc
tacaaagctcattacaacaacaacacgggcactctgaactgtgccaaaaaccccattctc
aactccatccacgaacctctgctgttcaagagcagctcaaaagaaaatgtgcaggagaca
caaatttag
DBGET
integrated database retrieval system
