Pleurodeles waltl (Iberian ribbed newt): 138246494
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Entry
138246494 CDS
T10800
Symbol
U2AF1L4
Name
(RefSeq) splicing factor U2AF 26 kDa subunit isoform X1
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138246494 (U2AF1L4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pwl03041
]
138246494 (U2AF1L4)
Spliceosome [BR:
pwl03041
]
Complex A
U2 snRNP components
U2 related factors
138246494 (U2AF1L4)
Complex B
138246494 (U2AF1L4)
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GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
DNA_alkylation
Motif
Other DBs
NCBI-GeneID:
138246494
NCBI-ProteinID:
XP_069057240
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Position
7:1460993141..1461052080
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AA seq
232 aa
AA seq
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MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQ
TADGSHLGHVSDMEVQEHYDSFFEEVFTEVQAKYGEIEEMNICDNLGDHLVGNVYVKFRR
EEDAERALAELNNRWFNGQAIHAELSPVTDFRESCCRQYEMGQCTRGGFCNFMHLKPISS
ALRRQLYGRARRRRGGSEPRSPPKGPRPQDRHRPNDRIRRRSRSPGPRHGRF
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtatcttgcgtccatcttcggtaccgagaaggacaaggttaactgttccttc
tactttaagatcggtgcctgccgccatggggacagatgttctcggcttcacaacaaacca
acattcagtcagactattgtgttgctgaacctgtatcggaaccctcagaatacagcccaa
acagctgatggctcccacttaggtcatgtgagtgacatggaggtgcaggagcactatgat
agcttctttgaggaagtttttactgaggttcaggccaagtatggtgaaatagaagaaatg
aacatctgtgataacctgggagatcacctcgtcggtaatgtttatgtcaagttccgccga
gaggaggatgcagagcgagcactggctgaactcaacaaccgctggttcaatggccaagcc
atccatgcagagctgtcgcccgtcactgacttcagggaatcgtgttgccggcaatatgaa
atggggcaatgcacccgtggagggttctgtaatttcatgcacctgaagcccatctccagt
gctcttcgtcgccagctgtacggccgtgcccgtcgtaggaggggtggttctgagcctcgc
tcccctcctaagggacctcgtccacaggaccggcaccgccccaatgacaggattcgcaga
agatctcgctctccaggaccgcgccacggacgcttctga
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