Pleurodeles waltl (Iberian ribbed newt): 138246583
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Entry
138246583 CDS
T10800
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138246583 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwl03019
]
138246583 (FIP1L1)
Messenger RNA biogenesis [BR:
pwl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
138246583 (FIP1L1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
138246583
NCBI-ProteinID:
XP_069057371
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Position
1_2:complement(974230324..974741226)
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AA seq
645 aa
AA seq
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MPASGGGELAPERMQVTPEPAGPPSSAVGQDEARDGKSDGGSPGPDLAASPDPAPTETAQ
AAAPATRGGDGDEEDDWLYGGTKTHSREPRDGDENEAARQHQGAAVREEVKSAQPAPPSE
LERTAENGISKPNVTEADEDTDTDSDDDDDDVHVTIGDIKTGAPQYGSYGTAPVNLNIKT
GGRVYGAAGGKVKGVDLEAPGSINGVPLVDVDLDTFEDKPWRKPGADLSDYFNYGFNEDT
WKAYCEKQKRLRIGPEALPVTSTTNKISINQKMMDYLAKEVQQGRAGNSEKDSAPQSVKS
EFTSPPPPYKGMPPPSVPEKLGYDSGYSSSLNSRKMTTAIDVIGQTSISRVEGRRRANTE
NSNIQVLSEQSPQEVDNNNFIKPMPPFFPPGAPPTHLPPPPFLPPPPSVSNAPPLIPPPG
IPITVPPPGFPPPPGGPPPSLIPTIESGHGSGYDGRSGPAFPYGGVSFPHMPGSAAPWAN
LVDPGKQWDYYGRRDKERDRERDRDRERDRDRDRERERTRERDRERERDRDHSPGGGVYS
RVDPVPLRSDEERYRYREYTERSYERHRERVSREKEERHRERRHREKEETTRHKSSRSTS
RRRHDSEEGEGHRRHKHKKSKRSKEGKETGGEPLAEQDNDPAAGD
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccagtggcggcggggagctcgcgccggagcgcatgcaagtgacgccggagccg
gcggggccccccagcagtgctgtgggacaagatgaggcgcgtgacgggaagagcgatgga
ggatcaccaggcccggatctcgcagcaagtcccgatcctgctccaactgagaccgctcaa
gctgcagcacctgcgacccgtggaggtgacggagatgaggaggatgattggctctatggt
ggtacgaaaactcatagcagagagcctagggacggggatgaaaatgaggctgctagacaa
catcagggtgcagcagtgagggaagaagtaaagagtgcacagccagcaccaccctctgaa
ttagaaaggactgctgaaaatggaatatcaaagccgaatgtaactgaggcagacgaagat
acggacacggacagtgatgacgatgatgatgatgttcatgtcaccatcggagatataaaa
acaggagcgcctcaatatggaagctatggaacagcgcctgtaaatctgaacatcaagact
ggtggtagagtttatggtgcagctggagggaaagtaaaaggtgttgatcttgaggcacca
ggaagtattaacggggttccactagtggatgtggacttggatacttttgaggacaagccc
tggagaaaaccaggtgcggacctctcagattatttcaattatggttttaacgaggatact
tggaaggcatactgtgagaaacagaagagattacgaataggaccagaagcattacctgtc
acgtcaacaacaaataaaatttcgattaaccagaagatgatggattatctggcaaaggag
gtacaacagggtcgtgctggaaattcagaaaaagattcagctcctcagtctgtcaaatca
gaatttacgtctcctccgccaccttacaagggaatgccacctccaagtgttccagagaaa
cttggatatgattctggatattcctcatcattaaatagtaggaaaatgactactgccata
gatgttattggacagacttcaatctctcgtgtggaaggaagacggcgggctaacactgaa
aacagcaatattcaggttttatctgagcagtctccacaagaagttgacaataacaatttt
attaaacctatgccaccatttttccctcctggtgcacctcctacccatcttccaccacca
ccgttcctcccaccacctccatctgtcagtaacgcgccaccactgatcccacccccaggg
ataccgataactgtgccacccccaggttttccacctcctcctggaggtccgccaccatcc
ctaataccaaccattgaaagtggccatggctctgggtatgatggtcggtccggtcctgca
tttccatatggtggtgtttcttttcctcacatgcctggctcagctgctccatgggcaaat
cttgtggatcctggcaagcagtgggattactatggaagaagagacaaagagagagaccga
gagagagatcgtgatagggaacgagatcgtgatcgcgatagagaacgagagcgcacaaga
gaaagagatcgagaaagagagagagatcgggaccatagcccaggtggaggggtatacagc
agagtcgatcctgtgccactaagaagtgatgaagaacgttatcgatacagagaatatact
gaaagaagttacgaacgtcacagagaacgcgtaagcagagaaaaagaagagaggcaccga
gaacgaaggcatcgagaaaaagaagagacgactaggcacaagtcatctcgaagtaccagc
aggcgtcgacatgacagtgaagaaggagagggccacaggcggcataaacacaaaaagtct
aaaagaagcaaagaaggaaaagagacaggtggcgagcctcttgccgagcaggataacgat
cctgcggctggagattag
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