Pleurodeles waltl (Iberian ribbed newt): 138246970
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Entry
138246970 CDS
T10800
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin alpha-4-like
KO
K16499
protocadherin delta 2
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pwl04515
]
138246970
Cell adhesion molecules [BR:
pwl04515
]
Cadherins
Protocadherins
138246970
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
138246970
NCBI-ProteinID:
XP_069057820
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Position
7:867860818..867863222
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AA seq
801 aa
AA seq
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MGVVKQRLAGQWRLRCFLIFCLGDSVLGQIRYSVPEELERGAAVGNIAKELGISTVHLKA
RGPRVVSKDKKQFFRVDTNSGDLVIAERIDREGLCVQSAACTLHVELVIDNPLEMHRLEI
EIVDVNDNAPSFHEEEFILSIVESSFVGTKFPVEQAIDLDIGSNSVQNYMLSPNSNFDLN
IIRSSENSRSVELILNKLLDREERALYELILTAFDDGNPKKSGTVQIHVHISDANDNAPI
FDQAVYRIQLLENAPMGTMVAQVTATDIDEGPNSEVTYGFNKRVPSGVRQVFSIDELTGV
ITVQGLLDFEDSNVYELLLEATDKGPHPIAGHCKVVVEIIDENDNAPEITATSLSSSVPE
DAPPGAVIALLIVSDKDSGDNGKVDCTIPAALPFAVRNTFTNHYSLVLKMPLDRESTEEH
SIPVTATDRGAPALPSTTTLTVRVSDANDNSPRFAQPSYSKHLTENNVPGTHLFTISAAD
SDLQENGYLTYSLTPNTIYNNLVSINAENGKIYALKSFDYEEMRHFQFHVHAKDAGTPSL
SSNVSVDVFILDQNDNSPVVLLPDPGXGSFGPEYIPRTVEPGYLVSKITAVDADSGYNAW
LQYHLVQGKGDSLFRVGLCTGEIRTSRSIEERDGSHQRLILRVKDQGEPARSSTVTLRVS
FIDNNSEMVSEFIERRGAGDSMPDLNLYLVIAIAFISFIFLLTVIICVALKVYGSGGDTA
RCAQPSCLIAEGSLPSTQSNSYNVCLRNSKIDFLDVTGACLLSLGSHSTTGDLLAVEGTK
GLYTADLVCIDDGTVRAFLTF
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgaaacagcggctcgcaggacaatggcggctgcggtgctttctgattttc
tgtctcggggattctgtcctgggtcagatcaggtattcagttccagaggagctcgagcga
ggggccgctgtcggaaacatcgctaaggagttggggatcagcacagttcatttaaaagcc
cgtggaccccgagtcgtgtctaaggataagaaacagttcttccgggtggatacaaacagc
ggtgatttggtgatcgccgaacggatcgatagagaggggttgtgcgtgcagagcgctgcg
tgtacactgcacgtggaactggtaatcgataatccattggaaatgcatcgccttgaaatc
gagattgtggatgtaaatgacaacgccccttcctttcatgaggaggaattcatccttagt
attgttgagtcttctttcgtagggacaaagtttccggtagaacaggccatcgaccttgat
attggctccaattctgtccaaaattacatgctgagccctaactccaacttcgacctaaac
attatccgaagttctgaaaacagcaggtctgtggaactgatactaaacaagctcctggat
cgggaggaaagggcactttacgaattgattctcactgcatttgatgacgggaatccaaag
aagtctggaactgtgcaaatacacgttcacattagtgacgcaaacgacaacgctcccata
tttgaccaggctgtttacaggatacaactattagagaacgcacccatgggcacaatggtt
gcacaggtgactgccactgacatagacgaaggaccaaacagtgaagtcacttatggcttt
aacaagcgggtcccttcaggtgtgcgccaggtgttcagcatagatgaactcacaggtgtg
atcacagtgcagggactgctggatttcgaagactccaatgtatatgagctgttattggaa
gccacggataaaggaccgcaccctatagctggccactgcaaggtagtggtggaaattatt
gacgagaacgacaacgctcctgaaataaccgcgacttctctgtccagctctgtccctgaa
gatgctcctcccggagccgtcatcgcgctgttgatagtttcagacaaggattccggggat
aacgggaaggtggattgcaccattcctgcagctcttccgtttgctgtacggaatactttc
accaaccactattcactggtcctaaagatgcccctggaccgtgaatctacagaggagcac
agcatccccgtcaccgccacagacagaggcgcccccgctctgccctccaccacaaccctc
acagtgcgagtgtctgatgcaaacgacaacagcccccggtttgctcagccttcttattct
aagcacttaacggagaacaatgttccggggacccacctgtttacaatctctgcagcggac
tcggatctgcaagaaaatggctacctcacatattctctaacaccaaacacaatttataat
aacctcgtttcaataaacgcagaaaatggcaaaatctatgcactaaaatcgtttgattac
gaggaaatgcggcattttcaattccatgtccacgcaaaggatgctgggactccctccctc
agcagtaatgtatccgtcgatgtattcatactcgatcagaacgacaattctccagtagtc
ctgctccctgatcctgganacggctcatttggccccgagtacatccctcggactgtggag
cccggttacctcgtgtcaaagataacagccgtggatgcggacagcggatacaacgcctgg
ttacaatatcacttagtgcaaggaaaaggagattctcttttcagagtcggactgtgcacg
ggggagataagaacatctcggtccattgaagagagagacgggagtcaccagcgcctgatc
ctgcgcgtgaaggaccagggagaacccgcgcgttcaagcacagtcacactccgcgtcagt
ttcattgacaataacagcgagatggtgtccgaattcatagagcgccgcggcgcaggggac
tccatgccggatctaaacctgtatttagttatcgcaattgcgttcatttcctttattttt
ctgttaacagtaattatatgtgtggccctgaaagtttatggaagcggcggtgacactgcg
agatgtgctcagccctcctgcttgattgccgagggaagtctgccctccactcagagcaat
agttacaacgtgtgtctgaggaattctaagattgacttcttggacgtcactggcgcctgc
ctcctgtccctggggagccattccaccaccggggatctgctggcggtggaggggaccaaa
ggcttgtacacagcggatctcgtgtgtatagacgacggcacggtaagagcgtttttaact
ttctaa
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