Pleurodeles waltl (Iberian ribbed newt): 138246971
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Entry
138246971 CDS
T10800
Name
(RefSeq) protocadherin alpha-8-like
KO
K16499
protocadherin delta 2
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pwl04515
]
138246971
Cell adhesion molecules [BR:
pwl04515
]
Cadherins
Protocadherins
138246971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
TMEM154
Motif
Other DBs
NCBI-GeneID:
138246971
NCBI-ProteinID:
XP_069057821
LinkDB
All DBs
Position
7:867891499..867893910
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AA seq
796 aa
AA seq
DB search
MRKCRRRCLPLLLMSLWDLALGQLRYSVSEEVEPGTFVGNIAKDLGLDLVLLNSRGLKLV
SGAAKQPFQVNMNSGLLLTNARIDREEMCAQSPACKLVSEIVIDNPLEMHRLEVDIVDVN
DNAPSFVDSEITLSIFESASPGSRFPVQKAVDPDSGTNALKGYTLNVNPNFDLNILTDPD
RSRAAELVLKAALDRERAPTHNLILTAFDGGDPRRSGTLQIHIIVQDANDNAPTFDQLVY
HVKLMENVPVGTTVVQLHATDPDEGPNGDVTYYFNKPVPESVQRTFSLDERTGVITVHGM
IDFEEATAYTISVAATDRGSFSVPGHCKVLVEISDVNDNAPDLTITSQVHSIAEDAKPGT
VIALLIVSDKDSGENGNTSCSLPPGLPFVLENTFNNHHSLVLRGSLDRESVEHYEVTLTA
VDGGSPPLSASTVISVRVSDVNDNCPKFTQPSYSLHLAENNVPGAQVFAISAADPDLKEN
GHLTYSLVGDIVRGGFVSINSENGKIYAMKSFDYEEIKYFRFQVQGKDAGVPPLSSNVSV
DVFILDQNDNAPEILPSYHQIHSLGGEVIPRSVEPGYLVSKIRAVDADSGYNAWLLYQTG
YSRDNSPFKVGLYTGEIRTSRPIRESDAADHRFVVVVKDHGEPALSSTVTVTISLSNSNA
EILTEFRKDSETEHSISDINLYLVICIAVISFIFLVLVIIFVALRIYRVNGSQTGYNQQH
CAATIGSLCYFENNYKVCLRNSGNGTFEVNGVYPMLSENNTSERSSVPPAPGHKQQSIDD
LLMIGEDQVRTDFRLY
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcggaagtgtcgccggcggtgcctccctcttctcctgatgtctctctgggatctcgcg
cttggacagctccggtactccgtctccgaggaggtggagccgggaacctttgtgggaaac
atcgctaaggacctggggctcgatctggtccttctgaattcgcgaggactgaagctcgtg
tcaggcgccgcgaagcagcccttccaggtgaatatgaacagcggtctattactgactaat
gcccgcattgacagggaggagatgtgtgcgcagagccccgcctgtaaactcgtttcagaa
atagtcattgataaccccctagaaatgcatcgcctggaggtggacattgtggatgtgaat
gataacgccccctcctttgtggacagtgagatcacactgagtatctttgagtcggcttca
ccggggtctcggttcccggtacagaaagctgtggacccggactcgggaaccaatgctctt
aagggttacacgttaaacgtcaatcctaatttcgatctcaacatattaactgaccccgat
cgcagcagggccgcagagctggttttgaaagctgccttggatagagagcgcgcccctact
cataacctcattttaactgcgtttgacggcggtgacccgaggagatctggaactcttcaa
atacacattatagtgcaagatgctaatgacaacgcccccacgtttgatcagctcgtgtat
cacgtaaaattgatggagaatgtgccagtgggtacaactgtggtacagctacatgccaca
gaccccgacgaaggcccgaatggtgacgtcacgtactacttcaacaaacctgtccctgaa
agtgtacagagaacattctctctagatgaacgcactggtgtgataaccgtgcacggaatg
atcgattttgaagaagccacggcttacacgatttcagtggcagctacagatcgaggatcc
ttctcggttcctggccattgtaaggttctggtggaaattagcgacgtcaatgacaacgca
ccagatttaactataacgtctcaggttcactccattgccgaagatgccaaacccgggaca
gtgatagccctcttgattgtttcagataaggattcgggcgagaatgggaacacatcctgc
tctcttccgcctgggctcccatttgtccttgaaaacacgttcaacaaccaccactctttg
gtgttgagggggtccctggaccgcgagtctgtggagcactacgaggtcaccctgacagct
gtggatggagggtcacctccactgtccgcctccacagtcattagtgtgcgagtttctgac
gtgaatgataactgtcccaaattcacacaaccatcgtactcgcttcatctggcggagaac
aatgtccctggggcccaggtgttcgccatttctgccgcagatcccgatcttaaggaaaat
ggacacctaacatattctctcgtgggagacatagtacgtggtggctttgtctcaataaat
tcagagaatggtaaaatctatgccatgaaatcttttgattatgaagaaataaaatatttt
aggtttcaagtgcagggaaaagacgcaggcgttccacccctcagcagtaatgtgtctgtg
gacgtctttatactcgaccaaaatgacaacgccccagagatcctaccttcttatcatcag
atacactctcttggtggagaagtcatccctcgatcagttgagccggggtatctggtatca
aaaatcagagctgttgacgcagatagcgggtacaatgcctggttactttatcaaactggt
tattccagagataattctccttttaaggttggactatacacaggagagattaggacatca
cggcctattagagaaagtgacgcggccgatcacaggttcgttgttgttgtgaaggatcat
ggagagcctgccctttccagtactgtcactgtcacgatttctttatcgaatagcaatgca
gaaatcctcacagagtttagaaaagactctgaaactgaacattctatttcagatataaat
ctgtatttggttatttgtattgctgtcatatcttttatttttttggttcttgttatcatt
tttgtggctctaagaatttacagagtaaatggtagccagactggctacaaccaacaacac
tgtgcagccacaataggaagtttgtgttactttgaaaacaactataaagtttgcctcagg
aattctggaaatggtacttttgaggttaatggagtttatccaatgctgtctgaaaataac
accagtgagaggagtagcgtaccaccagctccaggacataagcaacagagcatcgatgac
ctgttaatgattggcgaagatcaggtaagaacagattttcgattgtattga
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