Pleurodeles waltl (Iberian ribbed newt): 138247090
Help
Entry
138247090 CDS
T10800
Symbol
LIMCH1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
Domain-containing proteins not elsewhere classified [BR:
pwl04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
138247090 (LIMCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138247090
NCBI-ProteinID:
XP_069057938
LinkDB
All DBs
Position
1_2:complement(1014468871..1015131783)
Genome browser
AA seq
1801 aa
AA seq
DB search
MGGWQSPFHPPCLFLAARWWRGLGSHSCGSVGAAAAERRVAAERSRGARPGRGYRCQLRS
PCARAVRSRLPPAQSGSERMASPGLDLAGVPPLQESAPEAAFSEAQKWIEQVTGRCFGDK
DFRSGLENGILLCELLNAIRPGLVKKINRLPTPIAGLDNISLFLRGCKELGLKESQLFDP
GDLQDTSNRAALKNTDYSRKLKNVLVTIYWLGKAANSCTSYSGATLDLKEFEGLLAQMRK
ETDDIDSPKRSIRDSGYIDCWDSERSDSLSPPRHGRDDSFDSLDSFGSRSQQTPSPDVVL
RGSSDGRGSDSESDFPHRKIPDVKKDDMSARRISYGENKAFVPFNQYLPNKSNQTAYIPA
PLRKKKAEREEYRKSWSTATSPLGGERPFSQSHPEQIKEEKFEVLSDGKFNEPIKEDSLT
RPGGKPPSIQADMNPYPVVSKDQTVTEGQKEVSADKLGQDDSEELRKLKKLERIGIRVMP
AAKRYSSPNQTSEDHGTKPGTPDIILRKENTFLVGYHGKGSDSEEDNDECRVPDIQKDDL
ATRRIRMSQIKPTPVSQLPLGLYAVQKGNKREDLRLPAQEHSGTSPALTSQKQGRLEEGN
QILTRKENPFLSLCENESEEEEEPEKIPDVQRDDLAKRKTQGSSSQPREPPSFVNVSITK
ADLETWERLKVSAETSDDESRLPLHKDKSDSKATEEVPVSVEDDLACRKARESRKRGHPR
QRFVHFGPVTEIDQQKWEKLSIAKPEAVGEAAVEKSSSQACAAAASTSPACAPITCTKEL
EEEVLHPDPSSSVPMPAAAAHCHIAGSPSSTSSAFLKEESSQVLKVESQRHIETEDGTRT
PDREKDDMRMRRTGAVQKLSSPGLRHFLPVPFTRKKEDLTVGPTKIDKPVRSTTKPPLCT
LDEHVQTLLPVRAECLPKVATQPQPTDVADGDQHLETTEDAEHDHRPLVSPPKYPALNQI
VPGQAAEEEPETFSPRIALSDDTESVSMFDVRCDDAAVTQPHSRVHQEQLQNVNNLLKEE
DDQWQDDLARWKTRRRSVSQDLIKKEEERKKMEKVLSGEDALSERRKSIKTYREIVEEKE
RREKELHEAYKNAKSQEEAEKILQKYIERFTISEAVLESLQMPKILERRHSVEPNKRSPP
EDPNPMKYLRQHSLPVTAPKFTATVEASISPTSETEAKFSTGRTSPTKTAMSKAVPLLVP
KPYSQPKTTHALKTFKVDGKVNMNGEAFNGIEDENESRCASVVFAPSASRSQMFEGVARI
DEPQEQLKPEATTIELNLRKPVSRTVYKEVTASPTEERIQANQKEDKNSGGCTERRDSGH
VPPEVTDPERTQQTTINSSNTGTTSMEHKSTDVCKEVAEKEKVVKCVARDTPKEVLFKKK
AVKSETNELEEYAVFEFFKKPSKATHPPCQNTSEQVDSSSGEKSPEHVSFVSQVRRVVTC
QLVLVPTLNLTKRVNFWTWDPEEERKRQERWQQEQERLLQERYQKEQEKLKDEWEKAQKE
VEEEERKYLEEERKIIEDTVVPFTISSSSAEPFSSCSSSSVTENNMGPLSLVRPVGEQKN
HHEVAEQQTCAAPIGTEHVEEKQPTAVNEKQNSVWDHNGDSLLSNGKGDLWLENKSRKEV
SEPCPETLLPIRSEERSQTRAEECSSPARMQLHLQGAPKTSQHFLQEPPVSEEHGLKASS
LGSSLQVHTSGGIRSYRNESHENIRAGQSSPCSPTPQCHSPGRAVSGKKLCSTCGLPLGK
GAAMIIETLSLYFHIQCFQCGICKGQLGDTTSGTDVRIRNGLLNCNDCYIRSRTAGQPTT
L
NT seq
5406 nt
NT seq
+upstream
nt +downstream
nt
atgggcggatggcaaagccccttccacccgccttgtttatttttagctgcgcgctggtgg
cggggactcgggtctcactcgtgtgggtccgtgggggcggcggcggcggagcggagggtg
gcggctgagcgcagcagaggagcccgccccggccgcgggtaccggtgtcagctcaggtcc
ccgtgtgcgcgcgcggtccgcagccgccttcctccggcgcagagcgggtcggagaggatg
gccagcccggggctagacctggccggggtgccgccgctgcaggagtcggcccccgaggca
gccttcagcgaggcgcagaaatggatcgagcaagtgactggcagatgttttggggataag
gacttccggtctggattggagaacggcatcctgctgtgcgagctgctcaatgcgataagg
ccgggactagtaaaaaagatcaacagactgcccactcccattgcaggactggacaacatc
tccctcttcctgcgaggctgcaaggagctcgggcttaaagagtcacagctgtttgacccc
ggcgacctccaggacacgtccaacagagctgcactcaagaacacagactacagcaggaag
ctgaaaaatgtattagtcactatttactggctggggaaggccgcgaacagctgcacgtcg
tacagcggagccacgctggacctgaaggagttcgaaggtttactggcccagatgaggaag
gaaaccgatgatattgacagcccgaagcgcagcattcgtgacagcggctacatcgactgc
tgggactcggagcgcagcgactccctctccccgccgcggcatggccgggacgactccttc
gacagcctggactccttcggctcgcgctcacagcagaccccgtccccggatgtagtcctc
cgagggagcagcgatgggagaggtagtgactcggaatcagactttccacatcgaaagata
ccagatgtaaaaaaggacgatatgtctgctaggcggatttcctatggtgaaaataaagcg
tttgtgcctttcaaccagtacctaccaaacaagagtaaccaaactgcctatataccggct
cctcttaggaaaaagaaggcagagcgggaagaataccgtaaaagctggagtaccgccacg
tcaccactaggaggagagaggcctttcagccaaagccaccccgagcagataaaggaagaa
aaattcgaggtcttgtcggatggtaaatttaatgagccaattaaggaggattccttgacg
cgccctggaggaaaaccgcccagcattcaggcagatatgaatccgtacccagtcgtttca
aaggaccagacagtgactgaaggccagaaagaagtttcagcagacaagctgggtcaagac
gattctgaggagctcagaaaattaaaaaaactggaacgtattggcatcagagtcatgcca
gcagcaaagcgctacagcagtcctaatcaaacctctgaagatcatggcaccaagccagga
acaccagatatcatccttcgtaaagagaacacgtttttggtaggctatcatggtaagggc
tcggactccgaggaggacaacgatgagtgcagagttcctgatatccagaaggatgacctt
gcaacccgaagaataaggatgagccagatcaagccaactccagtcagtcagcttcctctc
ggactctacgcagtccaaaagggaaacaagcgagaagatctccgactgcccgctcaggag
cattcggggacgagcccagctctgaccagtcaaaagcagggacgattggaagaggggaac
caaattttaacacgcaaggaaaatccatttctgagtctctgtgagaatgagtcagaagag
gaggaagagcctgagaagattccagatgttcaaagagatgacttggccaagcgcaaaact
caaggcagctcttcgcagcctcgggagccaccgagctttgtcaacgtctcgataaccaag
gcagatttagagacctgggagaggctaaaagtgtcggctgaaacgagtgatgatgagtcc
aggcttcccttgcataaagataaatctgattcaaaagccacagaggaagtgccagtgtca
gttgaggatgacctcgcctgccgtaaggcaagagagtccagaaagaggggtcaccccagg
cagaggtttgtgcactttggacccgttaccgagattgaccagcagaaatgggagaagctt
agcatagctaagcccgaggctgttggcgaagctgcagtagaaaaatctagttcccaagct
tgcgctgcagcagcgtcaacttctccagcttgtgcaccaatcacctgcaccaaagagctg
gaagaggaggtgttgcatcctgaccccagcagtagcgtgccaatgcccgccgccgctgca
cattgtcatatagcgggatcgcctagttccacaagcagcgcttttctaaaggaagaaagc
tctcaagtgcttaaagttgaaagccaaagacacattgaaactgaggatggcacgagaact
cctgatcgagagaaggatgacatgaggatgaggagaactggggcagttcagaagctgagc
agccctggcttgaggcacttccttccggttcctttcactaggaagaaagaggacctcacc
gtgggaccaacgaaaattgacaaaccggttagaagcaccacaaaaccccccttatgcacg
cttgatgaacatgtgcaaacacttttgccagtaagggctgaatgccttccgaaagttgcc
acacagccccaacccaccgacgtagctgatggggatcagcacctggagacaacagaagat
gccgagcatgaccatcgacctttagtctcccctccgaaatatcccgctttaaatcagatt
gtcccaggccaggctgcagaagaagagcctgaaacattcagcccaagaattgctctgtct
gatgacacagagagcgtgagtatgtttgacgtaaggtgtgatgacgctgccgtcacgcag
ccacacagcagagtgcaccaggagcagctgcagaatgtgaataatctgctgaaggaggag
gacgaccagtggcaagatgatcttgcccgttggaaaacgcgcagaagaagtgtgtctcag
gaccttataaaaaaggaggaagaaagaaagaagatggagaaagtgctgagtggtgaagat
gcattaagtgagagacggaaaagcattaagacctacagagaaattgtggaagagaaagaa
cgtcgggaaaaggagctgcacgaagcctacaagaatgccaagtcgcaagaggaagctgag
aagatcctccagaagtacatagaaagattcactatcagtgaggctgtgcttgagagctta
cagatgccaaaaattttggaaaggcgacattctgtcgagccaaataaacgttctccccct
gaggatcccaacccaatgaaatacttaaggcagcactcgctcccagtgactgctccaaaa
tttactgccacagttgaagcatcaatttctcctaccagtgaaaccgaagcaaagttttca
actgggaggacttctccaactaaaactgctatgtcaaaggcagtgcctttgctggtgccc
aagccttactcgcaaccgaaaaccacacatgccctaaaaacattcaaggtagatggaaaa
gttaacatgaatggagaagccttcaatgggatagaggatgagaatgaaagcagatgcgcc
tcggtggtatttgcaccctctgcaagcagatcgcaaatgttcgaaggggtggccagaatt
gatgaaccccaggagcaactgaagccagaggccactacaattgagctgaacctacggaaa
ccagtatcccgcactgtttacaaagaggtgacggcatcaccgacggaagaaagaatccag
gccaaccaaaaagaagacaagaactctggaggatgcacagagagaagggattcaggacat
gttccgcctgaagttacagatcctgagcgaacacagcagaccacaataaattccagcaac
acaggtactaccagcatggaacataaatccaccgatgtttgcaaagaggttgcagaaaaa
gagaaggtggtcaaatgtgtggcacgggataccccgaaggaggtgctcttcaagaagaag
gcagtgaagtccgagaccaatgagctagaagaatatgctgtgtttgaatttttcaagaaa
ccttccaaagccacccatcctccatgtcaaaatacaagtgaacaagtggattccagtagc
ggtgaaaagtctcctgagcatgtctcattcgtcagtcaagtacggagagttgtgacgtgt
cagcttgttttagtacctacgctaaatttaacgaaacgtgtaaatttctggacttgggat
ccagaagaggaacggaagcggcaggaacggtggcagcaagaacaggaacgattgcttcag
gagaggtaccagaaggagcaggaaaagctgaaggatgaatgggaaaaggcccagaaagaa
gtagaagaggaggagcgtaaataccttgaggaggaacgcaagatcattgaagatactgtg
gttccttttactatttcttcgagctctgctgaacccttctcttcctgctcctcttcttcc
gtgactgagaataacatgggtcccttgtctctagtgaggcctgtaggggaacagaaaaac
catcacgaagttgcagaacaacaaacgtgtgcagcaccgataggaactgagcacgtggaa
gaaaagcaacccacagcagtgaacgaaaagcaaaattccgtgtgggaccataatggagat
tcacttctaagcaatggcaaaggggatctttggctggagaataaaagtagaaaagaagtg
tccgagccctgtccagagacgcttcttccaatccgaagtgaagagagaagccagacccgg
gcagaggaatgcagctcgccggccagaatgcagctgcatctccaaggtgcaccaaaaacg
tcacagcacttcctgcaagagccacctgtttcagaagagcatggtctgaaagcttcttcc
ttgggttctagtcttcaagttcacacctcgggaggaataaggagttacagaaatgaatcc
catgagaatatcagagctgggcagtccagtccatgttctccaacgccacagtgccactca
cctggccgggctgtcagtggaaagaaactgtgctctacctgtggtcttcctcttgggaaa
ggagctgccatgatcatagaaacactcagtctttatttccacatacagtgctttcagtgt
ggaatttgcaagggacagcttggagacacaacttctggcactgatgtccggatcagaaat
ggattgctaaactgtaatgattgctatatcagatcaagaacagcgggtcagcccacaacg
ttgtga
DBGET
integrated database retrieval system
