Pleurodeles waltl (Iberian ribbed newt): 138247233
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Entry
138247233 CDS
T10800
Symbol
ZBP1
Name
(RefSeq) Z-DNA-binding protein 1 isoform X1
KO
K12965
Z-DNA binding protein 1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04217
Necroptosis
pwl04623
Cytosolic DNA-sensing pathway
Brite
Messenger RNA biogenesis [BR:
pwl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
138247233 (ZBP1)
mRNA cycle factors
Stress granule specific factors
138247233 (ZBP1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
z-alpha
TrmB
FaeA
LexA_DNA_bind
HTH_IclR
AlkZ-rel
HTH_5
Motif
Other DBs
NCBI-GeneID:
138247233
NCBI-ProteinID:
XP_069058068
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All DBs
Position
7:214543830..214716305
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AA seq
478 aa
AA seq
DB search
MFSRATSLEEPGSGTEHCRARINMAAADDEGTNVRIMEFLKNGSSPKKAQDVAVHLSITR
SEANKHLYALEKKKKVEKRGSNHWRVCCESAGEEDFHETSALKNADASLVPVGCTALIEK
KVSLVASLNIQLTELEKQIWSHLKENGKRRSLEIAKGVGMQTKSDVNKSLYSLMDKGYIT
NEGANWFIKGTQEATASVPITINNIYIQKNPTNFICQQGPNNTISISESQHTQIGSCNTM
NTSTSTVVNERCLPSPFSIHGDTTRSSPEYHSSSVDVGEALPEMMTSPAPSQEVNITQSQ
LQNSMIGNNNVMAISYQIDGPRREEHNIESAENLTRNNSGFDTDSLSDDTGSSSENGDTT
RTITRDQNSGQNINIRDSAVKNTVIGNDTQVTIGDGFNNDMSWLISQTHKFRLVDENDCR
MGQTSPSTPSMIHITNSRVQNANFGNDNYLTIEKEEASPENSESEEEKEESVPNECGH
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgcgcgcaacgtcactggaggagccgggttctgggaccgagcactgtagagcg
cggattaacatggcagccgccgacgacgaagggacaaatgtgagaatcatggagttttta
aagaacggttcgtctcccaaaaaagcccaagacgttgctgttcacctgtccattacaagg
agtgaagcaaacaaacatctatacgcactggaaaaaaagaaaaaggtggaaaaacgaggc
tcgaaccactggcgggtgtgttgtgaaagtgcaggcgaggaagatttccatgaaacctca
gcactcaaaaatgccgacgcttccctagtccctgtaggatgcacagcactgatcgaaaaa
aaagtctctcttgtggcatccttgaatattcaactcacggagttagaaaaacaaatttgg
agccatctgaaagaaaatggtaaaagacgaagtctcgaaattgcaaaaggtgttgggatg
cagactaaaagtgatgtgaacaaaagtttatactcactgatggataagggatacattacg
aatgagggggcgaactggttcattaagggaacacaagaagcgacagcttcagtccccatc
acaatcaacaatatctacatacagaagaatcccacaaacttcatctgtcagcaaggtcca
aacaacaccattagtatttcggaatcccagcatactcagatcggaagctgcaacaccatg
aacacttctacaagcactgttgtgaacgaaagatgcttaccctcaccgttcagtatccat
ggagatactactcgcagttcccctgaatatcattcttcatcagtagacgtgggagaggct
ttgcccgagatgatgacatcccccgctccatcccaggaagtgaatattacccagtcacaa
cttcagaattccatgattggcaataacaacgtaatggcaatcagctatcagatcgacggt
ccaaggagagaagaacacaacattgaaagtgctgagaatttgacaaggaataactcaggt
tttgatacagattcactttcggacgacaccggatcttcgtcagaaaatggcgatacaact
cgtacaataacaagggaccagaactctggccagaacatcaacataagagactctgcagtg
aagaacactgtgattggcaatgacactcaagtgacaattggtgatggcttcaacaacgat
atgtcctggctgatctcacaaacacacaagttcagactagttgacgaaaatgattgcagg
atgggccagacctcacccagcacgccaagtatgattcatattactaactcacgagtgcag
aatgccaactttgggaatgacaactacctgaccatagagaaagaggaggcaagcccagag
aacagcgagtctgaggaggaaaaggaagaaagtgtgccaaatgaatgtggacattaa
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