Pleurodeles waltl (Iberian ribbed newt): 138247343
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Entry
138247343 CDS
T10800
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pwl03000
]
138247343 (SOX30)
Transcription factors [BR:
pwl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
138247343 (SOX30)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
138247343
NCBI-ProteinID:
XP_069058122
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Position
7:complement(939387664..939760562)
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AA seq
598 aa
AA seq
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MLPSTGSWGTCGDGQGTLTRAEDSKVNGTVEDNRGYSTKGVYVIVKDGAIKTEHMEEAKP
KKLVAEHEMEQRENASVTEPPTPNGYLHPQSKEMLLAQESTVYGTPSQDLRIPLTLHPVP
PGTRIQFQAPPASSEVIRLTKMPLTPVPIKMQSLMEPSVKIETKDVPLTVLPSDAGMPDT
PFSKDRNGHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEDQKKPYY
DEAQKIKDKHREEFPGWVYQPRPGKRKRFPLNVSTVFSGSTQNIITTNATALYPYRSPAY
SVVIPTLAHSVGDAPPPMPLPAPPLQRTAPITLFQSNTGNSGQISAQAPSLSLRPQMTPQ
RSVIPPQTEPHHSLPVPCSAPSRPLERPVPVTVDNTAKNTSNDSTLHPRFTSSDMHSSKE
YSGTTTCSRGTPIPHPHMYQPAPLSHPASLFGAPPRFSFHHPYFLPGPHYFPSSTCPYSR
PPFGYGDFTNPVPECLGFYEDRYQKHEAMFSALNRDYSFREYGDERPQSEDSRSCESLEG
MSYYNSHSGEDYLNSMPQLDIVALENVFSAPTSAPSRIQRVNVTDSEEEEEGKVLRDL
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgctcccttccactggttcatgggggacatgcggggatggccaaggtaccctaacaaga
gcagaagatagcaaggttaatggaactgtagaggacaacagaggatatagcactaaggga
gtgtatgttattgtcaaagacggagctattaaaactgagcacatggaggaagcaaaaccc
aagaagcttgtggctgagcatgaaatggaacaaagagagaatgctagtgttacagaaccg
ccaactcccaatggatatttacatcctcagagcaaagagatgctcttagcacaggaatct
acagtctatgggaccccctctcaggacctgcgaatacccttgacgctgcatcctgtgcct
ccaggcacaaggatacagtttcaggcacctccagcttcctctgaagtgattcgacttacc
aagatgccgttgacaccggtacccatcaaaatgcaatccttgatggagccatctgtgaaa
attgagactaaggatgtccctctgactgtcctaccatctgatgcaggaatgcccgatacc
ccattcagcaaggaccgaaatggccacgtgaagcgtccaatgaatgcattcatggtttgg
gctcggattcaccgtccagcacttgccaaagccaatccagcagccaacaatgcagagatc
agtgttcagcttgggctggagtggaataaactgagtgaagatcagaagaaaccttattac
gacgaagctcagaagatcaaagacaagcacagagaggaatttcctggttgggtttaccag
ccccgacccggaaaaagaaaacgcttccccctaaacgtctccacagttttctctggcagc
acccagaatatcatcaccacgaacgccacggcactgtacccataccgatcaccggcatac
tctgtggtaattcccacgctcgctcacagtgttggtgatgcaccacctccaatgcctctg
ccagccccgcctcttcagcgtaccgctcccatcactcttttccagtcaaatactgggaac
tctggccagatatcggcgcaggccccaagcttgtctcttcgaccccaaatgacccctcag
cgttcagtgatcccaccacagacagagccacaccacagccttccagtgccctgctcagca
ccatcgcgaccattggagcgacctgtaccagtgactgtggacaatactgccaagaatacc
agtaatgacagtactctgcatcccaggtttacttcctccgacatgcactcatccaaggag
tattctggtaccactacatgttctcgcgggacgccgatcccacatccccacatgtaccaa
ccggcaccactgagtcatcctgcaagcttgtttggcgcacctcctcggttctcattccac
catccatacttcttacccggaccacactactttccatcaagcacctgtccttacagccgg
ccgccttttggctacggagattttacaaacccagtgccagaatgcctgggcttctatgaa
gatcgctaccagaaacacgaagccatgttttcagccttgaaccgtgattattctttccga
gagtatggtgacgagcgacctcagagcgaggactctcgtagctgtgagagtctggaagga
atgtcttactacaacagccacagtggggaggactaccttaactctatgccccagctagac
attgtggctctggagaatgtcttctcagcccccacctccgcaccatcccgcatccagcgg
gtcaatgtgactgacagcgaggaagaggaggaaggcaaagttctcagggacttatag
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