Pleurodeles waltl (Iberian ribbed newt): 138247354
Help
Entry
138247354 CDS
T10800
Symbol
CPSF4L
Name
(RefSeq) putative cleavage and polyadenylation specificity factor subunit 4-like protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138247354 (CPSF4L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pwl03021
]
138247354 (CPSF4L)
03019 Messenger RNA biogenesis [BR:
pwl03019
]
138247354 (CPSF4L)
Transcription machinery [BR:
pwl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
138247354 (CPSF4L)
Messenger RNA biogenesis [BR:
pwl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
138247354 (CPSF4L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_4
zf-CCCH_3
zf-CCHC
LUC7
Nab2-like_zf-CCCH_
zf-CCHC_3
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
138247354
NCBI-ProteinID:
XP_069058124
LinkDB
All DBs
Position
7:994498995..994613751
Genome browser
AA seq
272 aa
AA seq
DB search
MQELIAGVEKFTFDIEMDVDEQRGAFPLPFHGMDKSGAAVCSYFTKGLCKKGPMCPFRHL
IGEKTVVCKHWLRGLCKKGDQCEFLHEYNMAKMPECYFYCKFGECSNKECPFLHIDPSSK
IKDCPWYDRGFCKHGPSCKHRHTRRVMCTNYLVGFCPQGPKCKFVHAKIDLTLCHSDHTK
TYIQRSSSMPLFDPEILSRHQELLMQEIPRFSQLAAASLVQHRMKSMQEGPSYSHPSGVL
RPLDQVTCFKCGEKGHYANKCTKNRCMFIMRK
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaactcatcgctggagtggagaagtttacgttcgacatcgagatggacgtggac
gagcagagaggggccttcccgctgcctttccatgggatggacaaatctggagctgctgtc
tgcagctatttcaccaaaggactgtgcaaaaaaggcccaatgtgtccattccggcatctg
ataggtgaaaagactgtggtttgcaaacactggttacgtggactgtgcaagaagggcgac
caatgtgaatttttgcacgagtacaatatggccaaaatgccagagtgctatttctactgc
aagttcggtgaatgcagcaacaaggagtgcccatttctgcacatcgacccctcatcaaag
atcaaagactgtccgtggtacgacagaggcttttgcaagcacggtccttcatgcaagcac
agacatacaagacgagtgatgtgcaccaactatttagttggattctgcccacaaggacca
aaatgcaaatttgttcatgccaaaattgacctgacgttgtgtcattctgatcacacgaag
acctacatccaaagatcatcatccatgccgcttttcgatcccgaaatactttcaaggcat
caagaactgcttatgcaagaaattccacgattctctcaactcgcagcagccagcctggtg
cagcatcgcatgaagagcatgcaggagggaccatcctactcccaccctagcggagtactg
cggcctctggaccaggtgacttgtttcaagtgcggagagaaaggccactacgccaacaaa
tgcaccaaaaaccgctgtatgtttattatgagaaagtga
DBGET
integrated database retrieval system
