Pleurodeles waltl (Iberian ribbed newt): 138248542
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Entry
138248542 CDS
T10800
Symbol
PAN3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
pwl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138248542 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
138248542 (PAN3)
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GFIT
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NCBI-GeneID:
138248542
NCBI-ProteinID:
XP_069058306
UniProt:
A0AAV7NDJ6
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Position
8:complement(1268820226..1269440608)
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AA seq
836 aa
AA seq
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MNSGLPSSPALPPPPPSGPLCSAAGLKLKYCRYYAKDKTCFYGDECQFLHEDPGAAGGML
GLSGGAGPLPAYASPPPPPGGGPGPPGPKKTDLGGLGTGLEAQRMAIAGMDGSSLSDASL
TDSYFSTSFIGVNGFGSPAEAKYPIMQWAGHEGRPMFRSERMTNSSSSPSILNDSAKSYS
GHDSLSSSSLFNDFGGLTMSQRRKGSEVLPAMRGIQMMVLGGESESWREPALQAPNPTAS
EFVPKGGSTSRLNNMSQSNLSAFSQALFSHQSMGSAAGAGLVPGMSLSAGSSPLHSPKIT
PHTSPAPRRRSHTPNPANYMVPTSASTPINNTVSQPQSASQIIQKETVGGTTYFFTDTPQ
APAAGMVFPNYHIYPPTAPHVAYMQPKANAPSFFMADELRQELINRHLITMAQIDQADMP
GVPTEVDSYHSLFPLEPLPPPNRIQKSSNFGYVTSCYKAVNSKDDLTYCLRRIHGFRLVN
TKCMMLVDMWKKIQHSNIVTLREVFTTKAFGEHSLVFAYDFHAGAETMMSRHFNDPGADA
YFTKRKWGQHDGPLPRQHAGLLPESLIWAYIVQLSSALRTTHTAGLACRVMDPTKIIITG
KTRLHLNCVGIFDVLTFDGNQNNPLALMPQYQQADLISLGKVVLALACNSLAGIQRESLQ
KAMELVTINYSSDLKNLIVYLLTDQNRLRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDL
SKEVQNGRLFRLLAKLGTINERPEFQKDPSWSETGDRYLLKLFRDHLFHQVTEAGTPWID
LSHIVSCLNKLDAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELLAAANGQL
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcggcctcccttcctccccggcgctgccgccaccgcccccctcaggccccctg
tgctctgccgctggcctgaagctcaagtactgtcgctactacgccaaggataagacctgc
ttctacggagacgagtgccagttcctgcacgaagatcccggagctgcggggggcatgctt
ggcctgagcggcggcgcgggaccgctacctgcctatgcgtcgccccctccgccgccggga
ggaggtccagggcctcctggaccgaagaagacggatttgggcggcctggggactggacta
gaggcgcagaggatggcaattgctgggatggatggtagtagtttatcagatgctagtctc
acggattcctactttagcaccagttttattggagtcaatggatttggaagccctgcagaa
gcaaagtatccaataatgcagtgggcaggacatgaaggccgcccgatgtttcgttctgag
aggatgacaaacagcagcagttcgcctagcattctaaatgacagtgccaaatcatattca
gggcatgattctttaagttcttcatcgttgttcaatgattttggtggcctaacaatgtcc
caaaggcgaaagggttcggaggtccttccagccatgagaggtattcagatgatggtactt
ggtggggagagtgaatcatggagagaaccagcattacaagccccaaatcctactgcaagt
gaatttgttccgaagggaggatccacttctagactgaataacatgtcccaatcaaacttg
tctgccttttctcaagccttgttttcacatcaatctatgggaagtgccgcaggtgctggc
ttagttccaggaatgtcgttatcagctggatcttctcctcttcattcccctaaaatcacg
cctcacacatctcctgctccacggaggaggagtcatactccaaacccagcaaattacatg
gtgcctactagtgcctctacacccattaacaatacagtttcgcaacctcaatctgcatct
caaataatccagaaagaaactgtaggtggaacaacatatttcttcacggacacgccccaa
gcacctgctgcaggaatggtatttccaaactatcacatttaccctcccacagcacctcat
gttgcatatatgcagccaaaagcaaatgcaccgtctttcttcatggcggatgaactcaga
caggaactgatcaacaggcacttaataacaatggcgcagattgatcaagcggacatgcca
ggggttcctaccgaagttgacagctaccacagcctatttccgctggagccgttgccaccg
ccaaataggatacagaaatccagtaactttggatatgttacatcatgctataaagcagtg
aacagtaaagatgatttgacatattgccttcgcaggatacatggtttcagacttgtaaac
acgaagtgcatgatgttggtggatatgtggaaaaaaattcagcactccaatatcgtaacc
ttgagggaagtattcaccactaaagcattcggagaacattcactggtgtttgcttatgat
tttcatgctggagcggagacgatgatgagcagacattttaacgatcctggtgctgatgcc
tatttcaccaaaaggaaatggggccagcatgatggacctttaccacgccagcatgcaggt
ttgttgccggaatctctgatttgggcttatattgttcaactaagttctgcactgcgaacc
acccatacggcaggactggcatgtcgtgttatggatccaacaaagatcatcataaccggc
aaaacaaggttacatttaaattgtgttggaatttttgatgttttaacatttgacggcaat
caaaacaatccactagcacttatgcctcaataccagcaagcagatctgatctcgttgggg
aaagttgtgttagctttggcttgtaactctttggctggaattcaacgagaaagtttacag
aaagccatggaattggtgacgatcaactattcctctgacctaaagaatttgattgtgtat
ttactgacggaccaaaacaggcttcgaagtgtcaatgacatcatgccaatgattggggca
agattttatacacaattggatgctgcacaaatgagaaacgatgtcatagaggaagacctt
tcaaaggaagtacaaaacgggagactatttaggcttttggcaaaactgggaacaatcaac
gagaggccagagtttcagaaagaccccagttggtcagagactggagacagatacttactt
aaactctttagggaccatcttttccatcaagtaactgaagcggggacaccctggattgac
ctcagtcacattgtctcttgtcttaacaagttggatgctggtgtgccagaaaaaatcagc
ctcatttccagagatgagaaaagtgtgcttgtggtgacttacagtgatttaaaacgctgc
tttgagaatacgtttcaagaactgcttgcagcggcaaatggtcagttgtag
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