Pleurodeles waltl (Iberian ribbed newt): 138248566
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Entry
138248566 CDS
T10800
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
138248566 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pwl04131
]
138248566 (SPATA13)
Membrane trafficking [BR:
pwl04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
138248566 (SPATA13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_2
SH3_9
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
138248566
NCBI-ProteinID:
XP_069058340
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All DBs
Position
8:1286177088..1286296439
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AA seq
1335 aa
AA seq
DB search
MGPPAAPAEDTAVHLKGDFHPLSRCDFAIKKGTAIEVTEPGSLDEEGLVGSSYRALSPNA
CGVANMTAFQNVCRNGMAVTPVFADNCEAKNTCNMAYHSVAGDIINLNLADKTAPDEKLS
PSRLGNIFSTPRKRMSPQGERPRSVLTTGHSSTWNALSSLKKMGSFKKLKSSVLQGIQTR
DNADVLKEGEIGSPGHHMQNGSSVNVKTLNRLSYPGSFQGCDSASDRLASDGSDAEDSED
TFLRSTHRSRSIRRAYGVGRINLQDNDKSRNQQTCTQARSPSSPEAKICEIVVKDPENNR
IIYRRSKSTDNLNFLKKSSFKRKSTSNLSDTPATNERLTPQRTTSTSSTDSDKVNGNSGR
QTKRWKSPIRAKDFDRVLKIVSNVADVPWKREGSKCTTPSPPRAENNRTRLNSQLHDDYS
RRVSSSTENDRRRGVSPARSQHSPHPESPSVVIPSCDQSLGVGTVTQVLATDAKLGRTNG
ETAASPSITMSCMGPFANDAFHPPSDDPQCCIRSLQFSTPTKPSMSKPQSPVVEISQCNI
PRNCPNHCSTLSLSSMESEERVEAPLSKLGKIPSYFQDPGTATYYDDANEDSGISSHSQL
SLNLTNEEKKEEVTSEDWRKSSSQDEEGSDATRIAPRRWSSGKSRPRPRPLSDYGQLACR
SFSIPEDAIAAKCQEMDSVDSENPLRSNVCGAHVSSGGNQRLWKRRPISVIGGVSFYGTI
QSEEIDELLTQPATRPPVPAHQVPPYKAISARFRPVAFSQSTPIGLDRVGRKRQMRASNF
SSDGVAESSALVDDNGSEEDYSFEEVCQANPRFLHPVEHLTIDKFTGDGVIYAEALWDHV
TMDDQELAFKAGDVIQVLDKQHDDWWWGRIDDHEAWFPASFVRLRVNQDDGLESSSSSQD
GDHDSDVSKHRHKNAENKDQMRTNVIQEIMNTERVYIKHLKDICEGYIRQCKKHTVMFTE
AQLSTIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGTCFLQHQEGFDIYSEYCNNHP
SACVELSKLMKQGKYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLGELLKYTTP
EHSDYENVKAAYEAMKNVACLINERKRRLESINKIAQWQVSIVGWEGLDILARSSELIHS
GELTNISKQGKSQQRTFFLFDHQLVFCKKDLLRRDILYYKGRVDMDEVELLDTKDGKDKD
FNFNVKNAFKILNQATEEVYLFCAKKQEDKKRWLQACSAERKRVQEDKEMGMEISENQKK
QAMQNAKKSRNGKMKGVNCNGCAVPPPHQNLHPIHQRHITVPTSIPQQQVFALAEPKCKP
TPFWHTFTKLAPFKK
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgggaccgcccgcggcaccggcggaggacacggcagtgcatctcaagggagatttccac
cctctcagtagatgcgacttcgcaatcaaaaaaggcacagccattgaggtgacggaaccc
gggtccctggatgaagaaggccttgtgggatcgagctatagggccttgtctccgaatgcc
tgtggtgtggccaacatgacagcatttcaaaatgtttgcaggaacgggatggctgtcacc
cctgtatttgccgacaactgtgaagcaaagaacacatgtaacatggcctatcacagtgta
gcgggtgacatcatcaatctcaaccttgcggataaaaccgctccagatgaaaagcttagc
ccttctagattagggaacattttctcaactcctcgaaaaagaatgagcccccagggtgaa
aggccacgctcagtgcttacgacgggtcattcttccacttggaatgctctttcctctctt
aaaaaaatgggatcgttcaaaaaattgaaatcatctgtccttcaggggattcagacaagg
gataatgcagatgttttgaaagagggtgagattggaagtccagggcatcacatgcagaat
ggttcgtcggtgaatgttaagacactcaaccggctttcataccctggctctttccagggc
tgtgatagtgcttcagacaggctggcctctgatggttctgatgctgaggactctgaagat
actttcttgaggagcactcacagatcaagaagcatcagacgggcctacggagtgggacgt
ataaacttacaggataatgacaaatcgcgcaaccaacagacctgcacccaggcccggtct
ccatctagtccagaggcgaagatctgtgagattgttgtaaaagacccagaaaacaacaga
attatttacagaagaagcaaaagcacagataatttgaactttctaaagaagagctcgttc
aagcggaagtctacctccaatctctcggatacacctgccaccaatgaacgattgacaccc
caaaggaccacgagcacttcttctactgactccgataaagtcaatgggaactctgggagg
cagacaaagaggtggaaaagtcccattcgtgcaaaagattttgacagagtgttaaaaatt
gtaagcaatgttgcagatgttccttggaagagagagggctccaaatgcactaccccttct
cctccaagggcagaaaacaacaggacaaggctgaacagtcagttacatgatgactattca
cgcagggtttccagcagcactgaaaacgacaggaggaggggtgtgtcacctgcacgcagc
caacattcgcctcatcctgaatctccctccgtcgtaattccatcttgtgatcagagtctt
ggcgtgggcactgtaacacaggtacttgcgactgatgccaaactgggtaggacaaatggc
gagactgcagcgagcccctcgattactatgagttgcatgggtccatttgccaatgatgca
ttccacccgcccagtgatgatccacaatgctgtatacgctccttacagtttagcacgcca
acaaaaccctccatgtccaaacctcaaagcccagttgttgaaatatcacagtgcaatatt
ccgcgtaactgtcccaaccactgcagcactttgtctctgagctcaatggaaagtgaggaa
agggtcgaagccccgctttcaaagcttgggaaaatccccagctatttccaggatcctggg
accgctacgtactacgatgacgcgaatgaagatagcggaatcagtagccactcccagctg
agcctgaacctcaccaatgaagaaaagaaggaagaggttaccagtgaagactggaggaaa
tcctcatctcaggatgaagaaggaagcgatgcaaccaggatcgcaccaagaaggtggagc
tcgggtaaaagccgtcctcggcctcgacccctctcagactatggacagctggcctgcaga
agcttctccatcccagaagatgcaattgctgctaagtgccaagaaatggacagtgtggac
agtgaaaatcctctcaggtcaaatgtatgcggagcccacgtttcttcagggggcaaccaa
agactctggaaaagacgtccaatctctgtcataggtggagtcagtttttatggaactatc
cagtcggaagaaattgacgagctgcttacacaaccagcaacacggcctcctgtcccagcc
catcaggtgccaccatataaggctatttctgctcgattccggcccgtcgccttctctcag
agcacacccattggcttggaccgagtaggtcgaaaacgacaaatgagagcttccaacttt
tcttcagatggtgtggctgagtcgtctgccttggtggatgataacggcagtgaagaggat
tacagctttgaggaggtctgccaggcaaaccctcgatttctacaccctgtagaacatttg
actattgacaagtttactggtgatggtgtgatctacgcagaggcattatgggaccatgtg
actatggatgatcaagagctggcctttaaagctggcgatgtaattcaggttcttgacaaa
cagcatgacgactggtggtgggggcggattgatgaccatgaagcctggtttcctgccagc
tttgtcaggttacgtgtcaatcaggatgacggtctagaaagttccagcagtagtcaggac
ggagaccatgattctgacgtgagcaagcaccgccacaagaatgcagagaacaaagatcag
atgcggacaaacgtcatacaggaaataatgaacacagagcgagtctacatcaagcatctt
aaagacatctgcgagggttacattcggcagtgcaaaaaacatactgtcatgttcaccgag
gcccaattgagcaccatttttggaaacattgaagatatttataagttccagcggaagttt
ttgaaggacctcgagaagcaatacaataaagaagagcctcacttgagtgaaatcggaacc
tgctttctccaacaccaagaagggtttgacatctactccgagtattgcaacaatcacccc
agtgcgtgtgttgagctttcgaagctgatgaagcagggaaaataccgccacttcttcgag
gcctgccggctgctgcagcagatgattgacatcgccatcgatggcttcctgctcactccg
gtgcagaagatctgcaaataccccctgcagttaggagagctgctgaagtacacgactcca
gagcacagtgattatgaaaatgtgaaggcagcctacgaggccatgaagaatgttgcatgt
ctgatcaatgagcgcaagcgaaggctggagagtataaacaagattgcacagtggcaagtg
tcaattgtgggctgggagggtctagacattttagccagaagctctgaactcatccattca
ggagaactcaccaatatctcaaagcaaggcaagagccagcagcggacgttttttctgttt
gaccaccagttggtgttttgcaagaaggacctgttgcgtagggacatcctgtactacaag
ggccgagtggacatggacgaggtggagctcctggacaccaaagatggaaaggataaagac
ttcaacttcaatgtgaagaatgcttttaaaatcttgaaccaagccactgaggaggtttat
ttgttttgtgcaaaaaagcaagaagacaagaagcgatggctgcaggcctgctcggctgag
aggaaacgggtccaggaggacaaagaaatggggatggaaatttcggaaaaccagaagaag
caagccatgcaaaatgcaaagaagtctcgtaatggaaagatgaaaggtgtcaactgtaac
gggtgcgctgtaccgcctccacaccagaacttgcacccaattcaccagcgacatattact
gtacctaccagtatcccgcagcagcaggtctttgcactggctgaacccaagtgtaaaccg
acacccttctggcacaccttcaccaaacttgcaccattcaagaagtga
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