Pleurodeles waltl (Iberian ribbed newt): 138248688
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Entry
138248688 CDS
T10800
Symbol
ZSWIM2
Name
(RefSeq) E3 ubiquitin-protein ligase ZSWIM2
KO
K15716
E3 ubiquitin-protein ligase ZSWIM2 [EC:
2.3.2.27
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pwl04121
]
138248688 (ZSWIM2)
Enzymes [BR:
pwl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138248688 (ZSWIM2)
Ubiquitin system [BR:
pwl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138248688 (ZSWIM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
SWIM
ZZ
zf-C3HC4
zf-rbx1
zf-RING_UBOX
VPS18_RING_C
C1_1
zf-RING_5
zf-ANAPC11
zf-UBR
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
138248688
NCBI-ProteinID:
XP_069058597
LinkDB
All DBs
Position
8:complement(1407352372..1407358056)
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AA seq
631 aa
AA seq
DB search
MRQTPWRRGPTDAVSWHLDQAANTTIYILRETGPTGFLLRDEDEAKPFKVLLGDPHTCNC
PSFLREKEPCKHICWLLLRRFKLPRDHEYAYQAGLVEREINSILRGLHSPDPATRKSPPP
ATTGAEEAQGRQKDLDSEDVCPICQDELLRRRLPVTYCRTCGNAVHINCMKIWTEHQPQP
EIGCTAKCPLCREDFAPLRLLKEEIRNASQSLTAAEKEKPERHLGIPCNNCMALPIEGLC
YKCNECNNFHLCQGCFTAGRHPPHQFLSRLKRNQRWRPLGYVSESPSEHKPCEELEAQLK
EEMGNIKGRSSSVPKQVLKSFPLMLVRQSSKLLSPGHQCRICLKAFSLGQYARLLPCRHT
FHRDCIDKWLLHEDACPLDKQVLYNPLTWKEVTGNEKLNNPGSVTSSTRLSNTKEAELFV
PGTGLFIKQKVHGHVEEMSQINGKSVFHEKDWPDLKHTPSSNVLEFQCSRQSSTKHCRAA
GTAGSEPYNCCKELAIDTFKKPCSIKLVDYIVPRKGILPKRIRGASSACGNLINTNKKQN
DTDFQGDPEWAATLHNRNTSKSAAALGFDADFNTGVLLGTSNFSLKGEPEAMRTQKGRRR
LLSRRPKQIPVSFQSPDVAFLMEGIPLNSPG
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgagacaaactccctggagaaggggtccgaccgacgctgtcagctggcacctcgaccag
gccgctaacactactatctacatcctgcgagagaccggtcccactggcttcctgctgcga
gatgaggacgaggccaagcccttcaaggtgctcctcggggacccgcacacctgcaactgt
ccttctttcctgcgggagaaggagccttgcaagcacatttgctggctacttctccggcgg
ttcaagctccctagagaccacgagtacgcatatcaagcggggttggtggagcgagaaatc
aacagtatacttcgggggttgcacagcccggacccagcaacgaggaagtctccacccccc
gcaacaacaggtgcggaggaggcccagggcagacagaaggatctggactcggaagacgtg
tgccccatctgccaggatgagctgctgagacggaggttgcccgtcacctactgcaggacc
tgcggaaacgccgtacacatcaattgcatgaagatctggaccgaacaccagccacagcca
gagatcggttgcacagcgaagtgcccgctgtgcagagaggacttcgcaccgctgcgcctc
ctaaaggaagaaatcagaaacgcgagccagtcgttgacggcggctgaaaaggagaagcct
gaacgacacctgggcatcccctgtaacaactgcatggctctccccattgaagggttatgc
tacaaatgtaatgagtgcaacaacttccacttgtgtcagggatgcttcactgctggccgt
cacccccctcatcaatttctttccagactgaagaggaaccaaagatggaggccactgggg
tacgtctcagaatcgccctctgaacacaaaccatgcgaggagctagaggctcagctgaag
gaagaaatgggcaatatcaaaggaagatctagtagtgtaccaaagcaagtcctcaaatcg
ttccctctgatgttggtcagacaaagtagcaagttgctatccccaggtcatcagtgtagg
atctgcctaaaggccttcagtcttggtcagtatgcaaggctcctgccatgccggcacacg
tttcacagggattgcatcgacaagtggctgctgcatgaagatgcgtgtcctctagataaa
caagttctgtacaatcccctaacttggaaggaagtgacaggcaatgaaaagctcaacaat
cctggatcagtgacatctagtaccaggttgtcaaacacaaaggaagcagaactgtttgta
cctgggactggattgttcattaagcagaaagtgcatgggcatgttgaggaaatgtctcaa
attaatgggaagtcagtctttcatgaaaaggattggccagacctcaagcataccccatcc
tcgaatgtattggagtttcagtgttccagacaatccagcaccaaacactgcagggcagct
ggaaccgcaggctcagaaccctacaactgttgtaaagagttagccatagacaccttcaag
aagccatgctcaatcaagttggttgattatattgtaccccggaaagggattcttcctaaa
cgcatccgaggtgcatcatctgcctgtggaaatctaattaatacaaacaaaaagcagaat
gacactgattttcaaggtgatccagaatgggcagcgacactgcacaacagaaataccagt
aaaagcgcagcagctcttggatttgacgcagatttcaatactggtgttcttttagggact
tccaacttcagtctaaaaggagaacccgaagccatgcgtacacaaaaagggcgacgtcga
ctcctttcaaggaggccaaaacaaatcccagtcagttttcaaagtccagatgtagctttc
ctgatggagggcattccgctcaacagccctggataa
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