Pleurodeles waltl (Iberian ribbed newt): 138248694
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Entry
138248694 CDS
T10800
Symbol
RUNX1
Name
(RefSeq) runt-related transcription factor 1 isoform X1
KO
K08367
runt-related transcription factor 1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
138248694 (RUNX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pwl03000
]
138248694 (RUNX1)
Transcription factors [BR:
pwl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
138248694 (RUNX1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Runt
RunxI
ABATE
TagH_SH3-like
Motif
Other DBs
NCBI-GeneID:
138248694
NCBI-ProteinID:
XP_069058606
LinkDB
All DBs
Position
8:complement(1409531158..1410015412)
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AA seq
506 aa
AA seq
DB search
MRIPVDTSTSRRFTPPSATLTPSKMSEPLTLDNTSAALAGKMRTADRSMVEVLADHPGEL
VRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELRNATA
AMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRHGAPT
AFQWKYSHSGMATIGHRQKMDEPTKPGSLSFSERLSELEQLRRTAMRVSPHHPAPTANAR
ATLNHATAFNPQPQSQIQDTRQVQTSPPWTYDQSYQYLGSIGTPAVHPAAPISPGRANGM
SAISAELSSRLTGDPRNVGVGFPDWISQECAPLYYLERNALKCASDLPAFSDPRVGIDRQ
FTTLPSISDPRMHYPGAFTYTPTPVSTGIGIGMSAMSTATRYHTYLPPPYPGSTQAQGNP
FQASSPSYHLYYGTSAGSYQFSMMSGGDRSPPRILPPCTNASTGSTLLNPNLPNQSDGID
TEGSHSNSPTNMGSTARLEEAVWRPY
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatccccgtagataccagcaccagccgccgcttcacgccgccttctgccaccctg
accccgagcaagatgagcgagccgctgaccctggacaacaccagcgccgccctggcgggc
aagatgaggactgcggaccgcagcatggtggaggtactggctgaccaccctggtgagctg
gtgagaacggacagtccaaacttcctctgctctgtgctgcccacccactggaggtgcaac
aagacgctccccatcgccttcaaggtggtagccttgggagatgttcctgacggcaccttg
gtcaccgtcatggccggtaatgacgagaactactccgcggaactcaggaacgcaacggcc
gccatgaagaaccaagtggcaagattcaacgacctccggttcgtgggccgaagtggacga
ggtaagagcttcaccctcaccattacggtcttcaccaaccctccgcaagtggcgacctac
caccgagccatcaagatcacggtggatggaccgcgagaaccacgacatggggctcccact
gcatttcaatggaaatactcccattccggtatggccaccattggacatcgccagaaaatg
gatgagccgaccaagcccggaagcttgtccttttcagagagactgagcgagctggagcag
ttacggcggaccgccatgcgcgtcagcccacaccacccagcccccacagccaatgccaga
gctaccttgaaccacgctacagcctttaacccgcagccacagagccaaattcaggacaca
aggcaagtacagacatcacctccatggacttatgatcaatcatatcaatacctgggttca
attggcacccccgccgtgcacccggctgcacccatctctccaggacgagccaacggcatg
tctgccatcagcgcagagctctccagccggctaacaggtgacccaagaaacgttggggtg
gggtttccagattggatctcacaagaatgcgcccccctatactatttagaaagaaatgca
ctgaaatgtgcttctgacctaccggccttcagtgatccacgggtaggaattgaccgccag
ttcacaacacttccatcaatatctgaccctcgtatgcactatcccggggctttcacatac
acaccgacccccgtctctacaggaataggaatcggcatgtctgccatgagcactgccaca
aggtaccatacctacctaccgccaccgtatccaggctcaactcaggctcaaggcaacccc
ttccaggccagctcaccttcctaccatctctactatggcacatctgcaggatcctaccag
ttctcaatgatgtcaggaggagatcggtcccctccacgcatccttcccccttgcactaat
gcttccacaggatccaccctgctgaaccccaacctcccaaaccaaagcgatgggatagac
actgaaggcagccatagcaattccccaaccaacatgggctccacagcaaggctagaggaa
gccgtgtggcggccatattga
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