Pleurodeles waltl (Iberian ribbed newt): 138248795
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Entry
138248795 CDS
T10800
Symbol
GTF2E1
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
138248795 (GTF2E1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pwl03021
]
138248795 (GTF2E1)
Transcription machinery [BR:
pwl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
138248795 (GTF2E1)
Prokaryotic type
Archaeal type
TFE
138248795 (GTF2E1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
DUF7385
Motif
Other DBs
NCBI-GeneID:
138248795
NCBI-ProteinID:
XP_069058803
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Position
8:1490930501..1491142533
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AA seq
442 aa
AA seq
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MTDPDVLTEVPAALKRLAKYVVRGFYGLEHALALDILIRNPCVKEEDMLELLKFDRKQLR
AVLNTLKADKFIKCRMRVETAADGKATRHNYYFINYRLLVNVVKYKLDHMRRRIETDERD
STNRASFKCPNCFSTFTDLEANQLFDMMTATFLCTFCKTEVEEDESAMPKKDARTLVARF
NDQIEPIYVLLRDTEDINLAYEILEPEPTEIPALRQSKERAAAAAAASGPHREAWTSKGP
SYDDMYNHSVVISIEEQEDLQRAAAEGKTVKERPIWLRESTVQGAFNDTENAKEDGVNVF
QGRDDGKAVVDDNEEVMQALLIHEKKSTTLAAAATGGGGATTLSATNASDSDSETSESDE
ETPPHPSTALSALHGLRGKDDDEDDDEEEFEDVATDPTVMVGGRPYLYSVVSQRPELVTQ
MTPREKELYMEMGQRIFEDMYD
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgactgacccagatgtcctcacagaggttcctgctgcactaaaacgcctggctaagtat
gtggttcgtggattttacggcctagaacatgccctggctcttgacatcctgatcagaaac
ccatgtgtgaaggaggaggacatgctggagctgctgaagtttgaccgcaagcagctgcga
gctgttctcaacaccctcaaggcggacaaattcattaaatgcaggatgcgtgtggagact
gccgccgatggcaaagccacgcggcacaactactacttcataaactatcgcctgctggtg
aacgtagttaagtacaaactggaccacatgaggcggcgaattgagacagacgagagagac
tccaccaaccgggccagcttcaagtgccctaattgcttcagcacgttcacagatctggag
gccaaccagctgtttgacatgatgactgccacgttcctctgcactttttgcaagactgaa
gtcgaggaagacgagtcagccatgcccaagaaggacgcaaggaccctcgtggcgcggttc
aacgaccagatcgagccaatttacgtacttctccgagacaccgaggacattaacttggcc
tatgaaatcctggagcctgagcccaccgagatccctgctctcagacagagcaaggaacgc
gcagcagccgctgctgcagccagtggtcctcaccgtgaagcttggacatcgaaaggtcca
tcctacgatgacatgtacaaccacagtgtggtgattagcattgaggaacaggaagatctg
cagcgagcagcagctgaaggaaagacggtcaaggagagacccatatggctgcgggagagt
acggtccaaggggcatttaatgacaccgagaacgccaaagaagatggcgtgaacgtgttc
caagggcgtgacgacggcaaagcggtggtggacgacaacgaagaggtgatgcaggctctc
ctcattcacgagaaaaagagcaccacgttggcagcagccgccactgggggtggcggggcg
accacgctctccgccacaaacgccagcgactctgatagcgagacaagcgagtcagacgag
gaaacaccgccccacccatcaaccgctttgtccgctctacatgggttgcggggcaaagac
gatgatgaagacgacgatgaggaggagtttgaggacgtggcgactgatcccactgtaatg
gtaggagggcgcccctacctctacagtgtggtgagccagcgacctgagctggttacgcag
atgacaccacgtgaaaaggagctttatatggaaatgggccagagaatttttgaggacatg
tatgactga
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