Pleurodeles waltl (Iberian ribbed newt): 138248854
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Entry
138248854 CDS
T10800
Symbol
TTF2
Name
(RefSeq) transcription termination factor 2
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pwl03021
]
138248854 (TTF2)
Transcription machinery [BR:
pwl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
138248854 (TTF2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Zn_ribbon_GRF
DEAD
Motif
Other DBs
NCBI-GeneID:
138248854
NCBI-ProteinID:
XP_069058908
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All DBs
Position
8:1515439482..1515614773
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AA seq
1259 aa
AA seq
DB search
MEKVHCQDHGSLCLLKTGVRDGPNKGKSFYVCAAKLDSPCGFTLPVDIPASHCLQHVNFL
VELQALVKQQERGDYKLYYRCVKSKADGVRWCGRIPWQGQKPRELPRNEKSQQALTNQLH
SKPERNPFKILNENLEPSAWKQVHEERQERKMVEEKQKAKDRIMEDEKISSDCRREQELP
VGMKVKKNHERKRMDPVEETRSGKELHEQLILKDGHISQEKSRENEFTTAAKNHVRCSGD
KPPASSDAEVRPKVEQSMTGSKGKDSTDHGVLEEKLKDIRAEGVIVNKHREKAADEKNRD
PLAAVKHSASRELELKLKTHTTSGESCQNGKTSEPKRELCSDESQVTLKDSTQTKKPGQE
HPSQSSLSGEDQPKADLKIPKASTMSAGVGLCPPTSAAKCHTAIPVEKGTTVEKEACGGG
VASTAPDDDDDEIIFVSSKPGEVVVPRSAHSSMRSSVGTVQRTITSFPGFGHVPPVSAPL
HPTELHNQLKTQLKLKKATLATVNVQALPDKGQRLLKQVKDLEDALSALNLSTSENPGTG
IDLKDAAPWKTTLPEPCNPFSRVTMTYPSTIPLAKTLPFQDQRTSSLGLQGLSSGSHQNY
NQVYGVNPQWQSLYGGRMTEDRLCAVRNVTSEAIDHLHKSLESCPSPETTVEDPPGLKVP
LMLHQKQALSWLLWREAQKPAGGILADDMGLGKTLTMIALILAQKKQQKVKEKEDKKLEA
WISKNDSSIVPSRGTLIICPASLIHHWKKEVEKRVSSSKVRVYLFHGPNRERESQTLAEY
DIVVTTYSLVAKEIPVTKDEGNSPAKDPDVEDKTLQCSTLLRIAWARVILDEAHNIKNPK
VQTSIAVCKLRAGTRWAVTGTPIQNNLLDMYSLLKFLRCSPFDEFKLWKNQVDNGSKKGG
ERLNILTKSLLLRRTKDQMDSTGKPLVVLPQRRCEVHRLKLSEDEQSVYNVLFARSRSTL
QSYLKRHEHKDRVQPQRSDNPFERVAQEFGASQQECQISAQQPPQGSSTVHILSLLLRLR
QCCCHLALLKMALDQLELKNEGITLSLEEQLNALTLSELDTPDPQSMVSLNGSSFRADLF
ENTRESSKISSLLLKLKAIRSSPGAQKSVIVSQWTSMLKIVAVHLKRIGLSYATIDGSVN
PKLRMDMVEEFNTNPKGPQVMLVSLCAGGVGLNLIGGNHLFLLDMHWNPALEDQACDRIY
RVGQLRDVVIHRFVCEATVEEKIADLQEKKKELAKKVLSGTGEAFTKLTLADLRVLFGV
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggtgcattgccaggaccacggatctctttgccttttgaagacaggggttcgt
gatgggccgaacaaaggcaagagcttctacgtctgtgctgcaaagcttgactctccctgt
ggatttacactgcctgttgacattccagcctctcactgccttcagcacgttaactttctt
gtggagctccaggcattggtcaagcagcaggaacgaggagactacaagctctattatcgg
tgtgtgaagagtaaagcagatggtgtccggtggtgtgggcgcattccttggcagggtcaa
aagcccagagaactgccacgaaatgagaaatcccagcaggctctcacgaatcagttacat
tccaaaccagagcgaaaccctttcaagatcctgaacgagaacttggagccctctgcgtgg
aagcaggtacatgaagagcgtcaggaaaggaagatggtagaggagaaacagaaagccaag
gaccgtattatggaggatgagaagatctcgtcagactgtcggcgagagcaagagctgcca
gtgggcatgaaggtgaaaaaaaaccatgaaaggaagagaatggaccctgtcgaagaaaca
agatcaggaaaggaactgcacgagcagctgatcctgaaagatggacatatttcacaggag
aaaagtcgtgaaaatgaattcacaactgcagccaagaaccatgttagatgttcgggggac
aaaccacctgcttccagtgatgctgaagtcaggcccaaagtagaacagagtatgacaggg
agcaaaggcaaggactctacagatcatggtgtgctagaggaaaaactcaaggacattagg
gcagaaggtgtgattgttaataagcacagagaaaaagctgcagatgaaaagaacagagac
cctttagcagctgtcaagcacagtgcttccagagagttggaactgaaacttaaaacacat
actacaagtggggaaagctgtcagaatggcaagaccagtgaaccaaagagagaactctgc
agtgacgagagccaagtgactttaaaagatagcacacagactaagaaaccaggccaagag
cacccgagtcaaagcagtttgtctggagaggatcagcccaaagcagacttgaagatcccc
aaagccagtactatgagtgctggggttggcctatgccctcccaccagtgctgcaaagtgt
catactgccattccagtggagaaaggtacaacagtcgagaaggaagcttgcggtggagga
gtcgcatccactgctccagatgatgatgatgatgagatcatatttgtttccagcaaacct
ggtgaagtagttgttcctcgttctgctcattcttccatgcgatcctctgtgggtaccgta
cagaggacaatcacctcgttcccaggatttgggcatgttcccccagtgtctgcacccctg
caccctactgaactccacaaccagctcaagacgcagctcaaactaaaaaaggcaacattg
gcgaccgtgaatgttcaggcccttcctgacaaggggcagcggttactgaagcaagtgaaa
gatttggaggatgcacttagtgctctcaacctctccacgtccgagaacccggggacagga
attgatctgaaagatgcggctccatggaagactacgctcccagagccctgcaatcccttc
agccgggtcactatgacatacccaagcacaatacctctggcgaagactctcccttttcaa
gaccaacgcacaagctctttaggcctccagggcctctcttctggatcgcatcaaaactac
aatcaggtttatggagtgaacccacagtggcagtctctctatggaggtagaatgacagaa
gatcggctctgcgcggtgcggaatgtcacaagtgaggccatcgaccacctacacaagtcc
ttggagtcatgcccatcgccggagaccactgtggaagatccacctggactcaaggtccct
ctaatgttacaccaaaagcaagcactgtcatggctgctctggagagaggcccagaaaccc
gcaggaggaattttggctgatgacatgggactggggaaaactttaactatgattgcgctc
atcctggcccagaagaaacagcagaaggttaaagaaaaagaagacaagaaactagaggcc
tggatctccaagaacgattcttcaattgtgccctctcgtggaacattgattatctgccca
gcatccctgatccatcactggaagaaggaagtggagaagcgtgtgagcagtagtaaagtg
cgagtctatctcttccatgggcccaaccgggagagagagagtcaaactctcgctgagtac
gacatcgtggtgactacatacagtcttgttgccaaggagattccagtgacgaaggatgag
ggaaacagtcctgccaaagaccccgatgtggaggataagaccctccagtgctcgaccttg
ctacgtatcgcatgggctcgtgtcattctggatgaagcccacaatatcaagaaccccaag
gtgcagacctccatcgctgtgtgcaagctgcgagcaggaacccgctgggctgtgaccgga
actcccatccagaacaacctgcttgacatgtactcactgctgaagtttcttcgttgctct
cctttcgatgagtttaagctgtggaagaaccaggtggacaacggatccaagaaaggaggc
gagagactgaacattctaacaaaaagcttgctactgcgtagaaccaaggatcagatggac
tccactggcaaacccctggtagtcctcccgcagcggcgttgtgaggtgcatcgattgaag
ctttccgaggatgaacaatctgtatataatgtgctctttgcccgatctaggtccacgctg
cagtcttatctgaagcgacatgaacacaaagaccgagtgcagccacaaagatccgacaac
ccctttgagcgagtggctcaggagtttggagctagtcagcaggagtgccagatctctgca
cagcagccgccccagggctccagcactgtgcatatcctgtccctgctgctgcgtctgcgc
cagtgctgctgccacctggcactgctgaaaatggccctggaccagttggagctgaagaat
gaaggcatcacattgtccctagaggagcagctcaatgcgttgacactgtcagagcttgat
acccccgatccccaatccatggtgtccctgaatggctccagcttcagggctgatctcttt
gagaacaccagagagagcagcaagatctcatctctactcctgaagcttaaagccatccgc
agcagcccaggtgctcagaagagtgtcatcgtctcccagtggaccagcatgctgaagatt
gttgcagtgcacctaaagcggattggcctctcctacgcaaccatcgatggctctgtgaac
cccaaactccgaatggacatggtggaggagttcaacaccaatcccaaaggtccccaggtt
atgttggtgtccctctgtgctggaggcgttggcttgaacttgattggaggcaatcacctg
ttcttgttggacatgcactggaaccctgccttggaagaccaggcttgtgatcggatctat
cgagtgggccaactccgggatgtggttatacacaggtttgtgtgtgaagctacagtggag
gagaaaatcgcagacctccaggagaagaagaaagagctggccaagaaggtgctgtcgggg
accggggaggcgttcaccaagctcacgctggcagacctcagggtgctttttggggtgtga
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