Pleurodeles waltl (Iberian ribbed newt): 138248931
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Entry
138248931 CDS
T10800
Symbol
U2AF1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138248931 (U2AF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pwl03041
]
138248931 (U2AF1)
Spliceosome [BR:
pwl03041
]
Complex A
U2 snRNP components
U2 related factors
138248931 (U2AF1)
Complex B
138248931 (U2AF1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
138248931
NCBI-ProteinID:
XP_069059050
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All DBs
Position
8:1531129901..1531252694
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AA seq
261 aa
AA seq
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MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ
SGDGLRSADGPVTTERNQSLCPELWTRLNPGAVSDVEMQEHYDEFFEEVFTEMEEKYGEV
EEMNVCDNLGDHLVGNVYVKFRREEDAEKAVMDLNNRWFNAQPIHAELSPVTDFREACCR
QYEMGECTRGGFCNFMHLKPISRELRRELYGRRRKKHRTRSRSRERRSRSRDRGRGGGGI
GGMPGGRDRDRRRSRERSGRF
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtacctggcctccatcttcggcaccgagaaggacaaagtcaactgttccttc
tatttcaagattggagcatgccgccacggagaccgatgttcccggttgcacaataagcca
acgtttagccagacaattgcactcttgaacatatatcgtaaccctcaaaactcttcccag
tctggcgacggtttgcgctccgctgatggcccagtcactacagagaggaatcaaagtctc
tgccctgagctctggacgcggctaaaccctggtgcggtgagcgatgtggaaatgcaggag
cactatgatgaattctttgaggaagtcttcacagaaatggaagagaagtacggggaagtg
gaggagatgaacgtttgtgacaacctcggtgatcatcttgtggggaacgtctatgtgaag
tttcgtcgagaagaagatgctgaaaaagcagtaatggatctcaataaccgttggttcaac
gcacaacccattcacgctgagctttcacctgtgacagatttccgggaagcatgctgccgt
caatacgaaatgggggagtgcacacgaggagggttctgtaacttcatgcacctgaaacct
atttccagagagcttcgccgtgaattgtatggtcgccgacgcaagaaacacagaactagg
tcgcggtctcgtgagcgccgctccaggtccagggaccgtggccgaggaggtggtggcatt
gggggtatgcctggaggaagagaccgggacagaaggcgatccagagaacgatcggggcgg
ttctga
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