Pleurodeles waltl (Iberian ribbed newt): 138249471
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Entry
138249471 CDS
T10800
Symbol
XNDC1N
Name
(RefSeq) protein XNDC1N
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pwl04040
]
138249471 (XNDC1N)
Ion channels [BR:
pwl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
138249471 (XNDC1N)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC1_N
TRP_2
Ion_trans
Ank_2
Ank
PKD_channel
Ank_3
zf-C2HC_2
Ank_4
Motif
Other DBs
NCBI-GeneID:
138249471
NCBI-ProteinID:
XP_069059530
LinkDB
All DBs
Position
8:complement(72799091..73104256)
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AA seq
1426 aa
AA seq
DB search
MSPLKIQHIVSFSSEDPKHPVENLLSGTHPWLSCPQDHSQHLKVELQLEQASHIGFIDIG
NCGSAFLEIDVGRASWPADQPFITLLPTTTLMTPADSKTGKNRTGVRMFKKGDFLPEAMS
ERWDRVRVTCSQPFNKRTQFGLSFLRIYTPPEESEDDDDTATAGPSKRQEEVVSEENAAS
LWPSCPAVRNSFFTENVQNGTQEEDLKNRLLQMDSSGSPRPGNQPCLSRSARMVISAARS
GRRSFPTGPNASPESPRSTSVAKRKSDTPLEEQGAAGTSQEALGSPPDTSMTPPARRGRL
ILRRKKIPGRLGAIGRSYLSASPWSRPRVWGRARHRGWGAIPSNRRPPVIHMPREEEEEE
EEDEEEEEDQIECGSCPICGGCFRMDFLPIHASTCGERVCPHGVPIVSSDEESSPEEVMS
SSSSPGPSTAWVPCPLCGLQFRASAIELHASACAEEMDSEDGQSPCLWVESCINGKTVND
SINDCSDYIQVDDYHLIVKININDDNCFVSETVTKPCIDKAVVFWFGRVENVDFKKKYVP
AQPRLVDPITMHNDYLEGDDDPEEGNQESGTAMEHLTQANWREIVNKKLKFPVALIGAIH
DGNLVQVQSLLQVSDGILRQLDDSEDRSWREALNLAIRTGNEEIMKTLLHCIKFDFRQIH
EALLVAVDTNQPHVVKMLLDRLDQEKGSKMDIKSFSMAFFDNSIDNSRFAPGVTPLTLAC
EKDLYEIVEMLMKKGHVITTPHKISCSCLECSNGRKYDLLKFSLSRINTYKGIASRAYLS
IASEDAMLRAFKLSRELKRLSKKEPEFKPEYLSLEDLCQEFAVELLGMCRNQSEVTAVLN
DCGDDSDEDELDNQTFEEGIPNLVRLRLAVNHNQKRFVAHPICQQVLSSIWSGKLTGWRG
SNTIWKILISCVIFLTMPLLCLVYWIAPKSKPGKMLKIPVLKFLLHSASYLWFLIFLLVE
SLIMESRHDIYAGRNQTIWQNSFHMIWVAGFFWFECKEVWIEGLRSYFLDWWNFLDMVII
SMYLASFSLRVLIAVKGYFICLDLPDSAECYYLTKTERYEWNTEDPQFISEVLFAMTSML
SFTRLTYILPAHETLGTLQISIGKMIDDMIRFIFILMIILTAFLCGINNIYVNYTTSDKL
GNFNETFQFLFWTMFQMVERTTVDMNHFMVAEFTGRVLYGLFTIVMVIVLLNMLIAMITN
SFQKIEDDADVEWKFARSKLYLSYFREGLTLPVPFNIIPTPKSLFYLIRGIFRFICCYNP
KKKQDYPPISSISNRHMGDNAGESRATYRLQVIKALVQRYIDTARREFEESKRKDLGNRI
TELNKNVIRLQSDVKLLRRSVSNGTLSSNPKDGSNVLSHYIMKVRNSFHNYDQDSLGSGK
GSAEATVHQDSEGAGVPEDECPPYPDEMSFTTENEMPPLEKTEEEE
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccactcaaaatccagcatattgtgtcctttagctctgaggacccaaagcaccca
gtagagaacctgctgagtggcacccacccctggttaagctgcccgcaggaccacagccag
catctgaaagtggagctacagttggaacaggccagtcacatcggcttcattgacatagga
aactgtgggtcggccttcctggagatcgatgtggggcgcgcctcttggcctgcggaccag
ccttttatcactctgcttcctaccactacgctcatgaccccggcggattctaagacgggg
aagaatcgcactggcgttcgcatgttcaagaaaggagattttcttcctgaggcaatgagt
gaacggtgggatagagtccgagtgacgtgcagccagcctttcaacaaacgcacccagttt
ggtctgtccttccttcgaatctacaccccaccagaagaaagtgaagacgatgacgatacg
gcaaccgctggtccgagtaaacgtcaggaagaagtggtatctgaggagaatgcagccagt
ttgtggccttcctgcccagcagtccgcaattccttctttacggaaaatgtacagaatggc
acacaggaagaggatctgaagaaccgtctgctgcagatggactccagtgggtctccacgt
cccgggaaccagccatgtctgagccgcagtgcacgcatggtgatctcagcagcgcgttct
ggcaggcgttccttcccaacagggccaaacgcaagtccagagtctcccaggtcaacatcc
gttgcgaaacggaaaagtgacactccattggaagagcaaggtgcagcgggcacgagccag
gaagctttgggctccccaccggatacttcgatgactcccccagcgaggagaggccggttg
atactgagacggaagaagattcctggacgccttggtgctataggaaggtcctatttgtct
gcctccccctggtctcggccacgggtatgggggagagcaagacatagaggatggggcgct
attcccagcaatagaaggccgccagtgatacatatgcctagggaggaggaggaggaggaa
gaggaggatgaagaagaagaagaggatcaaatagaatgcggcagctgtcctatatgcgga
ggctgtttccggatggatttcctccccatacatgcctctacctgtggagaaagggtgtgt
ccacatggtgtacctattgtgtcttctgatgaggagtcctctccagaggaagttatgagc
agcagcagctctcctgggccatcgactgcctgggtgccctgcccgctctgcggccttcag
tttcgagcatctgcaatcgagctccatgctagtgcttgtgcagaggaaatggactccgag
gatggccagtcaccctgtctctgggtggagtcgtgtatcaatggtaaaacggtcaatgac
tccatcaatgactgcagtgactacatccaggttgacgactaccatttaatcgtcaagatt
aatatcaatgatgacaactgctttgtcagtgaaactgtcaccaagccttgcattgacaag
gctgtcgtattctggtttggaagagtagaaaatgttgactttaaaaagaagtatgttcct
gctcaaccacgtctggtggatcctatcaccatgcacaatgactacctggaaggggatgat
gaccctgaggaaggaaatcaagagtcggggacagccatggagcacttgacgcaagccaat
tggcgcgaaattgtgaataagaagctgaagtttcctgtcgccttgatcggcgcaatccat
gatgggaacctcgtccaggtgcagtcgctgctccaggtcagcgatggaatcctacggcag
ctggatgacagcgaggaccgctcatggcgggaggccctcaacttggccatccgcacgggc
aacgaagagattatgaagactctgcttcactgcatcaagttcgactttcgacagatccat
gaagccctcctggtggccgtggacactaaccagccccatgtggttaagatgctgttggac
cgcctggaccaggagaaggggagtaaaatggacatcaagtctttctctatggcgttcttc
gacaactccattgacaactcccgctttgcgcctggcgtgactcctctgaccctcgcttgc
gagaaggacttatacgagattgtcgaaatgttgatgaagaaaggtcacgtcatcaccact
ccgcacaagatctcctgctcctgcctggagtgcagcaatgggcgcaaatatgacttgctc
aagttctcgctgtcccgtatcaacacatacaagggcattgcaagccgtgcatatctgtcc
atcgccagcgaggatgccatgctgagagcattcaagctgagtagggagctgaagcgtttg
tccaagaaggagcctgaatttaagccggagtacctgagtctagaagacctgtgccaggaa
tttgctgttgagctgttgggcatgtgtcgaaaccagagtgaagttaccgctgtcctgaat
gactgcggagacgacagcgacgaggatgagctggacaaccaaacttttgaagaaggcatt
cccaacctagtgaggctgaggctggcggtgaaccacaaccagaaacggtttgtagctcat
ccgatctgccagcaggtgctctcatcaatctggagcgggaagctgacgggctggcggggc
agtaacaccatctggaagatattaatctcatgcgtcatcttcctcaccatgcccttgctg
tgcctcgtgtactggattgcgccaaaatcgaagcctggaaagatgctgaaaatccctgtg
ctgaagtttctcctccactcggcttcctacctctggttcctcatcttcctcttggttgag
tctctgatcatggagagcaggcatgacatctatgctggcaggaaccagaccatctggcag
aactccttccacatgatctgggtggcaggcttcttctggtttgagtgtaaagaggtctgg
attgaaggtctacgcagctactttttggactggtggaacttccttgatatggtcatcatc
agcatgtacctggcttccttctccctcagagtcctcattgctgtaaaggggtactttatc
tgtctggatttgccggattctgccgagtgctactacctcactaaaacagagaggtatgaa
tggaacacggaggacccccagttcatctctgaggtgctctttgcaatgaccagcatgctc
agcttcacccgcctgacctacatcctccctgctcatgaaacccttggaaccctgcagatc
tctatcggcaaaatgatcgatgacatgatcaggttcatcttcatcctgatgatcatcctc
accgccttcctgtgtggcatcaacaacatctacgtgaactacacgacctcggacaagctg
ggaaacttcaatgagacattccagttcctgttttggaccatgtttcagatggtggaacgg
accaccgtggacatgaaccacttcatggttgcagagtttaccggccgggtcctgtacggg
ctcttcaccattgtcatggtcatcgtcttactcaacatgctgatcgctatgatcactaac
tccttccagaagatcgaggatgatgctgatgtggaatggaaatttgctagatccaagttg
tacctttcctacttccgtgaaggcctcactttaccagtgccctttaacattatccctact
cccaaatcgctgttctatctgatcagaggtatctttcgatttatttgttgctacaaccca
aagaagaaacaagactatccaccgatctcatctatttcaaacaggcacatgggagacaat
gctggggagagccgggcgacctatcggctgcaagtcataaaagccctggtgcagagatac
atagacaccgccaggcgtgagttcgaggagagcaagaggaaagatcttggaaaccgaatc
acagagctgaacaaaaatgtcattcgcctgcagtctgatgtcaagctcctgcggcgcagt
gtgtccaacggcaccttgtccagtaaccctaaagacgggtccaacgtgctgagtcactac
atcatgaaggtccgcaacagtttccacaactatgaccaggattcccttggctcgggcaaa
ggctccgctgaggctacagtgcaccaagatagcgagggggcaggcgtgcccgaggacgag
tgcccaccttatccagacgagatgtccttcacaacagagaatgagatgccaccacttgaa
aagactgaggaggaagaataa
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