Pleurodeles waltl (Iberian ribbed newt): 138249687
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Entry
138249687 CDS
T10800
Symbol
DCHS1
Name
(RefSeq) protocadherin-16
KO
K16507
protocadherin-16/23
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pwl04515
]
138249687 (DCHS1)
Cell adhesion molecules [BR:
pwl04515
]
Cadherins
Cadherin related
138249687 (DCHS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
RET_CLD1
Cadherin_2
Fibulin_C
Cadherin_4
CADH_Y-type_LIR
TMEM154
EphA2_TM
LapA_dom
Cadherin_C_2
ECSCR
Motif
Other DBs
NCBI-GeneID:
138249687
NCBI-ProteinID:
XP_069059764
LinkDB
All DBs
Position
8:complement(31294947..31623126)
Genome browser
AA seq
3266 aa
AA seq
DB search
MDHLWGHGRLNLLLLLGAWGLLGGQCNVLLGTLDLQIDEGQPAGTIIGDISAGLPPGSNT
YMYFISAQEGSGVTTDLEIDEITGIIKTAKVLDRESREQYSFIAVTTEGVTVEVTINVND
INDHAPAFPESHRVFRIPEHTPIGTRFPLDPAFDADSGQLNTQGYTIKRGNIGQAFRLDT
RRGSNGVLYLDLVVSGVLDRENRSSYSLVLEAYDGGSPHRSTQMTLDIVIQDINDNAPAF
NETRYHTLISENLKPGSNILQVFASDADEGENGVIIYEINRRQSDPDKYFEIDSKTGVIR
LSKGLDYEMRRVHELVVQARDNATHPEVSTAFVSIHVRDYNDNQPTMTIIFLSEDGSPQV
SEGAQPGQYVARISVSDPDYGEYSNVNVSLEGGDGKFALTTKDNIIYLIIVDKHLDREER
DSYELRVMATDSGTPPLRAESSFVLQVVDINDNPPLFDQQVYKQTIPEVVYPGSFVLQVT
ARDKDQGPNGDIHYSILHNQDTNSDWFAIDPATGIITTTTPLDYEKDPQPKLTVMATDRG
SPPLSSTAVVKVALQDVNDNEPTFSSNFYNVSLKENTPIGTCFLQVSAADADSGTFGSIT
YSLGSGIGSAVPTQFRIHKQTGELCTAQSLDRDEGPRTYDFTISAVDGGGLNSMAYVKVF
LDDINDNRPVFYPVDYAVSLSTQSMPGTAVVKVTAHDKDEGVNGRVTYRILSGNSPPLFT
LNKETGVISLSWALNGKANSLIQLVVSAQDGGGLSAHVNARVNISIVPGSVSPPFFEQPQ
YFFTVPEDIRRGASVGTVWAHNPPGHTEDIFYSISSGDPNGYFVMDSSTGNIRTNIPLDH
EAHPTLMLDVQARSGTPPAYSNTRVKITISDVNDNAPSFATPSDSILVPEATEMGSTIYT
LHAEDQDSGPNGHIQFDLVPSGERLFSIDRTSGRIRLIGALQYDTSSRYDLKILAKDSGV
PQLSSTFTLFVHVQAENDNGPIFDTLTYRVEVKEGTPVNSRFLQVRALSQESGASQVTYH
LRSDGDSASFGIVPETGWLFVKSTLDRETKDLYILTVLASSGGNDQKKTGSTTVRVSITD
ENDNVPKLREEMYFFTITENQPGGTAVGRVMAMDSDSGPNSRLTYRLLQHDPNFSINAQT
GDVSVRRSLDREQQSSYQLLVMVQDGGTPPRSTTGTIHVTVLDENDNAPSFLHAVAGREF
SVQVQEGKPSGTFIASLQAKDPDEGENATIFYSLTGSWAERFTINPNTGELRTATVLHQA
ERAEYTFTVKASDRGPQAKSTTAFIRIQVLPSSRLQPKPGSTTLTLHSVEGVRPGSVIGS
VASKSPSRHHNNQLTYTIVGGTDSAGTFVVDSTTGDIYLARELDYEAGAHYTLQISAEDD
SRGYLVSNLMVVDINIQDRNDHSPEFFEDPVTVVVSEDAEVGASIFTFQALDKDGAGPNS
EVFYTLVKQSPLDGHFQLNAHTGILSVAKALDREDTSSFLLVVRATDQAVNITQRKSSSV
TARVFVTDENDNAPVFLSPTAVSVMEDQPTGFVVLYVIAEDKDLGENGRVSYQIRSGNGE
GKFHLNPSTGSLAIVKGLDREEQDQYNLTVVATDHGNPRRTSTQSLSILIIDVNDEAPAF
EKSEYEVVVMENKPAGTTVVAVVATDRDSGSNGAVSYSAISEDGFRIDPVTGVVTTTYSL
DREKREHYIITVYAKDGGVPPHMAKAILKVTVGDENDHTPAFQGDSGYLEVPENQGRVVL
LTLKATDSDAGENGRVEYHIIAGDTNNDFILDSVLGTLATARNLDREVTSEYSLMVVARD
QGTPPRSVTIPLTIRILDLNDNGPAFSEASYTLDVPEDVPVGHSVLQLSATDEDEGTNGQ
ISYYLGNESLGMFHIDPETGLITTALPLDREKRSAYNFLAKAVDSAPSEPKSASVRIMVN
VRDVNDNAPLFTQNPLFVNVSRSTPLRQVVATMKAEDKDAGANASILYRFSTLVNGFSIN
SYTGEIQVTEPLASKNQRERTLFVVATDLGSPALSTTGVVVIYLLEETYRGVRFPRSTRE
VAIPENAAPGTAVLSIKAVHVAGSSGRITYSIISGNEDEAFVIQPNTGDISIQSSERLDF
ESTPKLHLVIQAESAASFGFMALRLNLQDINDNLPRFQLQNYVAFIWEAQGYGLPVIQVL
ADDVDQGQNGQVTYAIEQSQPMKGLFNIDPQTGAITTAAILDREIWSRTRLVVTAMDRGN
PPLVGSATLTVVVMDLNDNSPTIPLPLKLQVRENTTIGTEITQVTGNDVDSGPALSYTLL
LNGAPAGTFSILHYGGHITLMEPLDYEERSWYTLTIRSSDSQHETEANLTIIVEDVNDNP
PEFTQELYQVSLLEHTAPGTPVLTVTATDRDSGENGRVTYHLVSTAMNSFYIDSSNGTLF
TSQRIEFDSRRPTLDVLIEARDHGSPVLSSYSTVQIQVQDVNDNTPYFHQAQYNASISED
LKPGTTVLTLEATDDDLSRENAGFDYTIVSGNTGNAFQLETSVRFVEGRFQTIGAIILVD
KLDFETISVYNLTVAASDRGIPQKSAVVPVVVSILDVNDNPPVFPRTEYSIQVSESAPVS
TEVLRVAAHDSDSSPNDFIHYKISSGDQHQLFHINEGSGAIRLVKPLDRELQAVYVLVIQ
ASDSRGSQGNFALVPVTIEVKDINDNKPYFPVETLTTSIRENQPPNTVVTVIHAIDFDTG
VYGQIRYTVLDLPVAEPGMGEVKNLFSVNETSGELRSKLTFDYERTKAFKMMVKAVDAGN
FSASVTVQVLVTGEDEYDPIFHAPSFNFDVPEGAQKGEIIGQVMAEDKDQGADGVILYSF
AKPSPYFGVNETTGYIYLKMDSQRHRSGRAKRETREMTMDIHARSPLPTSRVATAQVTID
VTNTTFGLAPDINLVLVIAVAASLGVVVIIAVVAIALVVCRSRRKSRKKPETESQLSNIQ
SSSMQKIGHEDTTLASSDRIYHQTLPGFSSDQSGVGGTYTRGGSLDPSHSSGRGSAEAAE
DDEIRMINEYPRVASITSSMQDHISARGPDSGIQQDADQLSDISCDPAMETSQWFKNKKG
SGLLVQGQPHLYRDDGGGFVGVGCGLNISHPKDYAFPEDGKPSVDGSLTAIVASDEELRG
SYNWDYLLNWCPQFQPLASVFTEIARLKDETTMRRPFQPKPKAEPKPRIDPPPLITSVAH
PGAKTVPPKPAIGRTFPHLSSLRRSPISHEGSLSSAAMSPSFSPSLSPLAARSPVVSPFG
VSQGPSASIISTGHSLDNADEAELRI
NT seq
9801 nt
NT seq
+upstream
nt +downstream
nt
atggatcatctatggggtcacggccgcttgaacctgctgctgctcctgggtgcgtggggg
ctactgggtgggcagtgtaacgtcttgctgggcaccctggacctacaaattgatgaggga
cagcctgcgggtactattattggtgacatcagtgctggcctcccccctggctccaacacc
tacatgtacttcatctctgcccaggaaggcagtggggtgaccacggacctcgaaatcgat
gagatcacgggcattatcaagacggccaaagtgctggaccgcgagagccgggaacagtac
agtttcatcgctgtcactaccgagggcgtgactgtggaggtgactataaacgtcaatgac
atcaacgaccatgccccagcattccctgaaagtcaccgtgtgttccgaatacctgagcac
acgcccattggtacccgcttccctctggatccagccttcgacgccgacagtgggcagctg
aacacgcagggctacaccattaagcgggggaacattggccaagccttcaggctcgacacc
aggagaggctccaatggagtcctctacttggaccttgtggtcagcggtgtgctcgatcga
gagaaccgctcctcctactcattggtgcttgaggcctacgatggaggatctcctcacagg
agtacgcagatgaccttggatatcgtcatccaggatataaatgataatgcgccggccttc
aatgagacccgctaccacacgctcatctcagagaacttgaagccgggcagcaacatcctg
caggtgtttgcctccgacgcggacgagggagaaaacggggttattatatatgagatcaac
cgccggcagagcgaccccgacaagtactttgagattgactccaagaccggagtgatcagg
ctcagcaaggggctggactacgagatgcgtcgggtgcatgagctggtggtgcaagcgagg
gacaacgctacgcacccggaggtttccactgcctttgtctcaatccacgtgcgagattac
aatgacaaccagcccaccatgaccatcatcttccttagtgaggacggctctccacaggtc
tcggagggcgcccagccgggtcagtatgttgcccgtatctcggtgtccgacccagactat
ggtgagtactccaatgtgaatgtatcactggaaggcggagatggaaagtttgctctaacc
acaaaagataacattatctacttgatcattgtggacaagcacctggacagggaagagagg
gactcctatgagctgagggtcatggccactgattctggaacccctccgctacgggcggag
tcctctttcgtccttcaggttgtggacatcaacgacaacccacccctgtttgaccagcag
gtctataagcaaaccatccctgaggtagtgtatcccggcagctttgtgctgcaggtgacg
gcaagggacaaagatcagggaccgaatggggacatccattacagcatcctacacaaccag
gataccaactctgattggttcgccattgaccctgccactgggattatcaccaccaccacc
cccctggattatgagaaggacccgcaacccaagctgacagtgatggccaccgacaggggc
agcccccccctctcctccacagccgtggtgaaggtggccctccaagatgtcaacgacaac
gagcccaccttcagtagtaacttctacaatgtgtccttgaaggagaacacgcccatcggg
acctgcttcctccaggtctctgcagctgatgcggacagtggcaccttcggctccatcacc
tactccctgggctcgggcattggcagcgcggtgcccacccagttccgcatccacaagcag
acgggggagctgtgcacggcccagagcctggaccgcgacgagggcccgcgcacctacgac
ttcaccatcagcgcggtggacgggggtggactcaactccatggcctacgtcaaggtgttc
ttggacgacatcaatgacaaccggccagtgttttacccggtggactacgccgtgagcctc
agtacccagagcatgcccggcactgctgtggtcaaggtgacggcccacgacaaggacgaa
ggtgtcaatggacgagtgacctaccgcatcctctctgggaactctccgccgctcttcact
ctgaacaaggagacaggagtgatttccttgtcctgggcattgaacggtaaagccaactcc
ctcatccagctggtggtcagtgcacaggatggaggtggcctgtccgcacacgtcaatgcc
cgcgtcaacatcagcatcgttccaggatctgtctctccaccattctttgagcagccgcag
tacttcttcaccgtgcccgaggacatcaggagaggggcaagtgtgggcactgtctgggca
cacaaccccccaggtcatactgaggacatcttttactccatctcgtctggcgaccccaat
ggttactttgtcatggactccagcactgggaacatccgcaccaacatccctctggaccac
gaagcccaccccaccttaatgctagatgtccaggcgcgcagcggcactcccccggcctac
agcaacacccgagtgaagatcaccatctcagacgtcaacgacaatgcaccttcctttgcc
acaccgtctgactccatcttggtcccagaagctactgagatgggctccaccatctacaca
ctccatgctgaagaccaggacagtggcccaaatgggcacatccagtttgatctggtcccc
agtggggagaggctttttagcattgaccgaacctcaggaagaatccgactgattggggcc
ctgcaatatgacacgagctcccgctacgacctgaagatcttggccaaggacagtggtgtg
ccccagctgagctcaacatttacactcttcgtgcatgtgcaagcggaaaatgacaatggg
ccaatcttcgacacactcacataccgcgttgaggtgaaggaagggactcctgtgaattca
cgctttctgcaagttcgagccttgtctcaggagagcggtgcttcccaggtcacctaccac
ctccgctctgatggtgactcagccagcttcggcattgtgccggagaccggatggctcttt
gtaaaaagcaccctggaccgggagaccaaagacctctacatcctgacagtgttggcctca
agcggtgggaatgaccaaaagaagacgggctccaccacggtgagggtgtccatcaccgat
gagaatgacaacgtgcccaaactaagagaggagatgtactttttcaccatcaccgagaac
cagcccggagggaccgcagttggcagagtcatggccatggacagcgactctgggcccaac
agcaggttaacctaccggctcctgcagcatgaccccaacttctccatcaacgcacagaca
ggcgatgtcagcgtgagaaggagcctggatcgagagcagcaatcgagttaccagcttctg
gtgatggtgcaggatggtggaaccccaccacggagcaccacgggcaccattcatgtcact
gtgctggatgaaaacgacaacgcgccctccttcctacatgccgtggccgggagggagttc
tctgtgcaggtgcaggaaggtaaaccatcgggcaccttcatagcctccctgcaggcgaag
gacccggacgagggcgagaacgctaccatcttctactcactgacaggatcctgggctgag
cgtttcacaatcaatccaaacaccggcgagctgcgaacagcgacggtgctccaccaggcc
gagagagctgagtacaccttcactgtcaaggccagcgaccgggggccacaggccaaaagc
acgactgcattcatccgcatccaggtgctgccctcctccagactccagccaaagccaggc
tccaccacactgacgttgcactctgtcgaaggggtgcggccaggttctgtcatcggctca
gtggcgtccaagtcaccatcccggcaccacaataaccagctgacgtacaccatcgtgggt
ggaaccgactctgctggaacgttcgtggtagacagtaccaccggggacatctacctggct
cgagaactggattatgaggccggggctcactacaccttgcagataagcgcagaagatgac
tcaaggggctaccttgtcagcaatctgatggtggtggacatcaatatacaggaccgcaat
gaccacagccctgagttctttgaggacccagtcactgtggtggtgtctgaggatgctgag
gttggtgcctccattttcaccttccaggctctggataaagacggggcgggccccaacagt
gaggtattctacactctggtgaagcagtcacctctggatgggcacttccaactcaatgcc
cacacaggcattctcagcgtggccaaggccttggaccgtgaagacacgtcctcgtttctg
ctggtggttcgggccacagaccaggctgtcaacatcacccaacgtaagtcatcatcggtg
accgcgcgggtcttcgtgacggatgagaatgacaacgcgcctgtcttcctctccccaact
gcggtcagcgtgatggaggaccagcccactgggtttgtggtgctgtatgtcattgcagag
gataaagacctgggcgagaatgggcgagtgagctaccagatcagatcaggcaatggtgaa
ggaaaattccacctgaacccaagcacaggttccttggcaattgtgaagggcctggaccgc
gaggagcaggaccagtacaacctgacagtcgtagccacagaccacggtaatccacgcagg
acaagcacacagtcgctctccatcctgatcattgatgtgaacgatgaagcaccagccttt
gagaagagcgagtatgaggtcgtggtcatggagaacaagcccgccggcaccacggtggtg
gcagtggtggcaacggacagggattctggttccaatggtgctgtgagctacagtgccatc
tccgaggatggatttaggattgatcctgtcaccggggttgtcacaactacttactcgctg
gacagagagaagagagagcactatatcatcacagtgtatgcgaaggatggtggagtcccg
ccccacatggccaaggccatcctgaaggtcacagtgggcgatgagaatgaccacaccccg
gcatttcaaggagattcaggctacctggaggtgccggaaaaccaaggccgggtggtgctg
ctgacgctgaaggccaccgattctgatgccggcgagaatggacgtgtggagtaccacatc
atcgcgggagatacaaataatgactttattctggactcagtgttgggtacccttgcaaca
gccaggaatctggatcgtgaagtcacatcagagtactcgctcatggtggtcgccagagac
caaggaaccccgccgcgtagtgtgactatccctctcaccatccgcatcctggacctcaat
gacaacggtcctgctttttctgaggcctcttacacactggacgtgcccgaggatgttcca
gttggtcactctgtcctgcagctttcagccacagacgaggacgaaggaaccaatgggcag
atctcctactaccttggaaatgagtcactagggatgttccatattgatcctgagaccggt
cttatcaccactgcactgccgctggaccgtgagaagcggtcagcatacaacttcctggcc
aaagcggtggactctgccccgtccgagccaaagagcgctagcgttcgcatcatggtgaat
gtacgggatgtgaatgacaacgctccccttttcacccagaaccctcttttcgtcaatgtt
tcccgaagcacccctctcaggcaggtggtggccactatgaaggcagaagataaagatgcg
ggtgcaaatgcctccattttataccgtttctccacactagtaaatggctttagcatcaac
tcctacacgggggagattcaggtgacggagccgctggcgtcaaagaatcagagggagcgt
accttgtttgtggtggccacagacctcggttcaccagcactctcgaccacaggggttgtg
gtgatatatcttctggaagagacctaccggggagtacgcttcccccgcagcactagagaa
gtggccataccggagaacgccgctccaggcactgctgtcctgagcatcaaagccgtccat
gtggctggctcgtctgggcgaatcacttacagtattatcagcggcaatgaagacgaggcc
tttgttatccaacccaacacaggggacatctccatacagagctctgaaaggttggatttt
gagtcaacacccaagctccacttggttatccaggcagagtcggctgcatccttcggcttc
atggcccttcgcctaaacctgcaggacataaacgacaacctgccgcggttccagctgcag
aattatgtggctttcatctgggaggctcagggctatggcttgcctgttatacaggtgcta
gctgatgacgttgaccaaggacagaatggccaggtgacatatgccatcgagcagtctcag
ccaatgaaagggctcttcaacattgaccctcagacgggggccatcaccaccgcggccatc
ttggacagagagatttggtcacgcactcggctcgtggtgacggcgatggaccggggaaac
cctccgctcgtaggctctgccacgctgacagtggtggtgatggatctaaacgacaacagt
cccaccatcccacttcccctaaagctacaagtgcgagaaaacacaacgattggcacggag
atcactcaggtgacaggaaatgatgttgattcgggtcccgccctttcctacacgctgctc
ctgaatggcgcccccgcaggcacattcagcatcctgcactatggaggacacataactttg
atggaacctcttgactatgaggagaggagctggtacaccctcaccatccgctcttctgat
tcccagcacgagactgaggctaacttgaccattatcgtggaggacgtgaatgacaaccca
ccagagttcacgcaggaactctatcaggtcagtcttctggagcacactgcaccgggcacc
ccggtcctcaccgtcacagccaccgacagggactccggggagaacggaagggtcacgtat
cacctggtctctacagcaatgaactctttctacatagactccagcaacggaacacttttc
accagtcagcgcattgaatttgactccagaaggcctactcttgatgtgttgatcgaggct
cgggatcatggctcacccgttctgtcctcgtactccaccgtccagatccaagtgcaggat
gtgaacgacaacaccccctacttccaccaggcccagtacaacgcttccatatcggaggac
ctgaaacctggtaccactgtcctaacccttgaggccaccgacgacgacctttccagggag
aatgctggctttgattacaccattgtgagtgggaacactggcaacgccttccagctggag
accagcgtgcgctttgtcgaaggccgattccagaccattggtgccataatcctagtggac
aagcttgactttgaaacaatctctgtctacaacctcaccgtagctgcttcagaccgcggc
attcctcagaaaagtgctgtagtgccagttgtggtctccatactggatgtaaacgataat
cctccagtcttcccaaggacagagtacagcatccaggttagcgagagtgccccagtcagc
acagaggtcctgcgtgtagcagctcatgattcggactccagccctaatgatttcatccac
tacaaaatcagctctggtgaccaacaccagctgttccacatcaacgagggatcaggagcg
atccggctggtgaaacctctcgaccgagagctccaggctgtctatgtccttgtaattcag
gcatctgacagtcgaggcagtcaaggcaattttgctttggtgccagttaccatcgaggtg
aaggacattaatgacaacaagccatattttccagtggagactctaaccaccagcatcagg
gaaaaccaacctcccaataccgtggtaactgtgatccatgctattgattttgacactggt
gtttatgggcaaattcgctacaccgtgctcgaccttccagttgctgaacctggaatgggg
gaagtaaagaacctcttttcagtcaatgagacctcaggggagttgcgttctaagttaact
tttgactacgaaaggaccaaagcttttaagatgatggtgaaagcagtggatgctgggaac
ttctctgcttctgtcactgtgcaggtcttggtaaccggagaggatgagtatgatccaatt
tttcatgctccttccttcaattttgatgtgccggaaggagcacagaaaggtgaaatcatt
ggccaggtgatggccgaagataaagaccagggagcagatggtgtaattctctactccttc
gcaaagccttcaccctattttggagtaaatgaaaccactggctatatctacctcaaaatg
gacagccaaagacaccgcagcggccgtgccaaacgtgagacaagggaaatgaccatggat
atccatgcacgcagccctctacccacctcacgcgtagccactgctcaagttactattgat
gtcaccaataccacttttggcctggcacctgacattaaccttgtgctggtgattgctgtg
gcagcttctttgggagtagtcgtcataattgcagtggtggcgattgcacttgtggtgtgc
cgctcacgacgaaagtcaagaaagaaaccagagacagaatcccaactcagcaacatccaa
agcagctcaatgcagaagattgggcatgaagacaccacgcttgccagcagtgatcgcatt
taccaccagacactgccagggttctccagtgatcagagtggggttggtggtacgtacacc
agaggcggatccctggacccgtcccattctagtggccgcgggtcagcagaggcagcagaa
gacgatgagatacgaatgataaacgaataccctcgtgttgccagcatcacctcctcaatg
caagaccacatctctgccagggggcctgattcgggcatccaacaagatgcagaccagttg
tctgacatctcctgcgacccggccatggagacaagccagtggtttaaaaacaaaaagggt
tctggcttactggtccaaggccagcctcacctttaccgggatgatggtggaggttttgta
ggggtggggtgtggactgaatatatcacaccctaaagactatgctttccctgaagatggc
aagccgtctgtggatggctctctgactgcaatcgtggccagcgatgaagaactaagaggc
agctacaactgggattacttgttgaactggtgccctcagttccagcctttggctagcgtc
tttactgagattgcccggctcaaggacgagaccacaatgaggagaccattccagcccaag
cccaaagctgaacctaaacccagaattgatccgccaccgttgatcacatcggtggcccac
ccaggtgccaagacagtgccacctaaaccagccattggaaggacatttccccacctgtct
tctttgcgacggtctccaatcagtcatgaggggtctctctcatccgccgccatgtcaccc
agtttctctccttccctctcccctctggctgctcgatccccagttgtgtctccatttgga
gtctcacagggaccttctgcctccattatcagcactgggcattccctggacaatgccgat
gaggcagaactgcggatataa
DBGET
integrated database retrieval system
