Pleurodeles waltl (Iberian ribbed newt): 138249712
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Entry
138249712 CDS
T10800
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138249712 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwl03019
]
138249712 (NUP98)
03036 Chromosome and associated proteins [BR:
pwl03036
]
138249712 (NUP98)
Messenger RNA biogenesis [BR:
pwl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138249712 (NUP98)
Chromosome and associated proteins [BR:
pwl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
138249712 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
138249712
NCBI-ProteinID:
XP_069059830
LinkDB
All DBs
Position
8:70176665..70780384
Genome browser
AA seq
1786 aa
AA seq
DB search
MFNKSFGAPFGGGTGGFGATSTFGQTAGFGTTPTTGFGATAFGTNNNAGGLFGATQNKPG
GLFGATTFNQPATSTSTGFGFGASTGTTTGLFGTANTGGGLFSSQSNAFGQTKPAGFGNF
GTSTSSGGLFGTTSTTTNPFGGTSGSLFGPASFTAVPTGTTIKFNAPTGTDTMVKGGVST
NISTKHQCITAMKEYETKCLEELRLEDYLVNRKGPQNPVAAAAGATGLFGTPAATSTASA
GLFGSTTNTAFGQNKTAFGTTTTGFGTNTGSLFGASQPTQPNSLFSKPFGQPTTTQNTGF
SFGNTNTLGQPQPSTMGLFGGTQATPSAGLFGAATNTNAGTGFGAGSSLFGQPASGFGTV
GGSSLFNKPVGFGATTTSAPSFGTSTGGLFGFGANTAGTGLFGNKPATGTLGTGIGTGFG
TALGANQTSLFGNTQPKLGTLGTGAFGTTGFNTTNTGIGFGAPATQMGLTDPNAAAAQQA
VLQQQINTLAYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRPATR
VRPKALQTGSSKSQLFDGLDDDEPSLSNGSFMPKKSIKKLVLKNLNSNSLYSPMNRDGDE
LASPSEYPENGERSVENHISDGQKDDDEDHEMSRFYTNPIAKPIPHSLENKHNSVDDTIV
ALNMRNALRNGLEGSSEDNSFNDESLQDDREEELNTSHPSHPAGIILTRVGYYTIPSMDE
LAQMTDECGECIVNNFTIGRKGYGSIFFEGEVNLTNLNLDEIVHIRRKEVIVYLDDDKKP
PIGEGLNRRAEVTLDGVWPMDKTTRSLIKTPERLAEMNYENRLEAASRKQGAHFKDYRPE
TGSWVFKVDHFSKYGLQESDEEEEDNVAKTDAKKLKTAPVPPPGQTVQQMALNGKPTPPS
RSPVVEQLGSVMELDSDMADITQEPVPEVTMEDDTTEEQEPMSASSYIASSLGINPHTLQ
IMKASLFAEEDDGDIVFHQHFTTFPSRTDVSQEVTAPRLSISQSQVKLRPSVGGLFHARI
SAGALPSPRAASQDNFSPRVSSTGPPSSHSPWSVPGPLSSAFVMPGSAPEIPLKTVGARR
LQGPVPLEKSVAYGHGKLLMDMALFMGRSFRVGWGPNWTLAHNGQQLSGSGEIENLQNFE
SMDYGFLPKPISAKSLSESSFKVHVEKLSLVERKADDLECYQMPLEIVLRNSTFDTTQPC
PLIAPNLGVAAIHDYAEWVRDKCTSVEMETVVKHWHLTWTLCEAIWGNLKELEASLDEPS
GYVQSLERRKAFSRWLSQTAAERIEEEVSISRSDNHTEAVFSYLTGQRISEACKLSQLSG
DHRLSILLSQLVGCQQVRDLMMMQLVDWNKLQADCFIQEERMRIFTLLSGKPVWHLSDKR
CINVCAQLDWKRCLAVHLWYMLPPTASVPAALKMYEEAFQDPIEGEKYACSPLPPYLEDS
GISMEEDFLEEERERRPLRDVCFHLLKLYSDRHYELYQLLDPSSVTSDPLDYRLSWHLWT
VLQALNYTHLSEQSQGVLHASYAAQLENVGLWQWAIFVLLHITNTQMRERAVRELLNRHC
TLSETPESHDKEDFLVKRLSVPASWIHEAKAMRARKEGDKHKEALYLSKAGHWNQCHKLV
TRHLASDAIINERYEYLKGFLEHLASPEHSTLIQDWDTAGMVYLDYIYIIEMLNRIKQEF
SGYELERLHTKVTSLCSRIEHLQCHNAKDRLAQSEMAKRIANILRVVLSLQHSPESTSDS
TPDLQRVPLRLLGPHIGRLPMPEDYALEELRSLTQSYLRELTVCGQ
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataaatcctttggcgcaccatttggtggcggcactggtggtttcggggcaaca
tccacctttggacaaacggcaggttttggcactacccctacaacaggttttggagcaact
gcctttggaaccaataacaatgcaggcggcctgtttggggccactcaaaataaaccaggg
ggactctttggggcaactactttcaaccagcctgcaacctctacgagtactggatttgga
tttggagcatctacaggaaccacaaccggcctgtttgggactgctaacactggaggtggt
ctcttttcatcccagagcaatgcctttggacaaactaaacctgcaggttttggaaacttt
ggaacaagcaccagcagtggtggcctctttggaacaacgagcaccaccaccaatcctttt
gggggtacttccggctcactcttcggaccagccagctttacagcagtccctactggaaca
accatcaaattcaatgctcccactggcacagacacaatggttaaaggtggagtcagcact
aatattagtaccaagcatcaatgtataactgccatgaaggagtacgagaccaaatgtctg
gaggaactcagactagaagactacttggtgaaccgcaaaggcccccagaaccctgtggct
gcagctgcaggtgctactggcctgttcggcactcctgctgccacgtccacagcctctgca
ggattgtttgggtctactactaacacagcatttggccagaataaaactgcttttggaact
actacaactggatttggaacaaacacaggaagtctctttggagcctcacaacctactcag
ccaaacagcctattcagcaaacccttcggacagcccactacaactcagaacactggcttt
tcatttgggaacacaaacactttgggacaaccgcagcccagcaccatgggtttgtttgga
ggtactcaggccacaccatccgctggactttttggagcagcgaccaatacgaatgctggt
actgggttcggtgctggaagtagcctctttggacaacctgcttcaggatttggtactgtt
ggtggatcgagcctgtttaacaaacctgttggatttggagccaccacgactagcgcacca
tcttttggtacatccactggtggactttttggttttggtgcaaacactgctgggactggt
ctgtttggaaataaacctgcaaccggaactctgggaacaggaattggaacaggatttgga
acagctcttggggcaaatcagacatctctgtttggaaacactcaacccaaacttggaaca
ttgggaactggagcatttggaactacaggattcaacacaacaaacactggtattggattt
ggagctcctgctactcaaatgggattgactgatccaaatgctgcggctgcgcagcaagct
gttcttcagcagcagataaacaccttggcttattcaccattcggggactcgcctctgttc
agaaatcctatgtccgatccaaagaaaaaggaggagcgtctgaagccaacaaatccagct
gctcaaaaagccttgacgactcccacacattataagctaactcctcgcccagctacgaga
gtgcgaccgaaggccttgcagacaggatcttcaaaatctcagctctttgatgggctagat
gatgatgaaccttcactttcaaatggaagctttatgccgaagaaaagcatcaagaagctg
gttttaaagaaccttaatagtaatagcttatattcaccaatgaacagagatggagatgag
ctagcttctccgtcagagtacccagagaatggggaacggtcagtggagaaccacataagt
gatgggcagaaagatgatgacgaagaccatgagatgagcagattctacacaaatccaatc
gccaagcccataccccactctctggagaacaaacataacagtgtggatgacaccattgtg
gccctgaacatgcgcaatgcattgcgcaatggtctggagggcagcagtgaagacaactca
ttcaatgatgagtctttacaagatgaccgagaagaggagctcaatactagtcatccgtca
catcctgcaggtattatcctgaccagggtggggtattataccatcccttctatggatgag
cttgcacagatgacggatgaatgtggggagtgtatagttaacaacttcacaattggacgc
aaagggtatggatccatcttttttgaaggtgaggttaatctgacaaacctgaaccttgat
gagattgtgcacattcgcaggaaagaggtgattgtctatctggatgatgataagaagcca
cctattggagaagggttaaacagacgagctgaggtgacattggatggtgtttggcctatg
gataaaacaacccgatccttgataaagactccagaacgtctagcagagatgaactatgaa
aacagattggaagcagcatctcgcaagcagggtgctcatttcaaggactatcggccggag
actgggtcttgggtgttcaaggtcgatcatttttcgaagtatggtttacaagagtctgat
gaggaagaagaagataatgtggctaaaacagatgcaaaaaagttaaaaactgcacctgtc
ccacccccagggcaaactgtccagcagatggcactcaatggcaaaccaactcctccatct
cggagccctgtggttgaacagcttggaagtgtgatggaactggatagtgatatggcagat
attactcaggagccagttccagaggtcacaatggaggatgacacaactgaggaacaagag
cccatgtctgcgtcgtcatatattgcttcatcattgggaataaatccacacacactgcag
atcatgaaagcttctctatttgctgaagaagatgatggagacattgtttttcaccagcac
ttcactacatttccttcgaggacagatgtttctcaagaggtcaccgctcccagactttct
atttctcaatcacaagtaaaacttcggccatcagtgggaggattatttcacgccaggatc
tcggctggagcacttccttctccacgtgctgcttctcaagataactttagccccagggtt
tcctcaacaggcccaccctcctctcattcaccgtggtctgttcctggtcccctcagttct
gccttcgtcatgccaggctcagcacctgagataccattgaagactgtgggagcacgcagg
ctgcagggcccagtgcctctcgagaagtcagtcgcatatggccacggcaagcttcttatg
gacatggctctcttcatgggacgttcatttcgtgttggctggggtcccaattggacctta
gcccataatggacagcaactgagtgggtctggtgagattgagaatcttcagaactttgaa
tctatggactacggattcttgcccaaaccaatctccgctaaatcactttctgaatcctcg
tttaaagtacatgtggagaaattaagcctggtggagagaaaggcagacgatcttgagtgt
taccagatgcctttggaaattgtgctgaggaacagtacatttgacaccactcaaccatgt
ccactcatagctcccaatttgggagtagctgcaattcacgattatgctgagtgggtgaga
gacaagtgtacatcagttgaaatggaaacagtggttaagcactggcacctgacatggaca
ttatgcgaggcaatctggggcaacttaaaggagttggaggccagtctggatgagccaagt
ggatatgttcagagtctggaacgcaggaaagcgttctctcgctggctttcgcagactgca
gcagaacggattgaggaggaagtgtctatttctcgtagtgataatcacacagaagcagtg
ttcagctacctgactggacagaggatcagtgaagcttgtaaactatcacagctctcaggt
gatcaccggctctccattcttctgtcccagctggtgggctgccagcaggtaagggatctg
atgatgatgcagctggtggactggaacaaattgcaagcggattgctttatccaagaagag
aggatgcgcatcttcacccttttgtctgggaaacctgtttggcacttgtcagacaagaga
tgcataaatgtgtgtgctcagctggattggaagcggtgcctcgctgtccacctgtggtac
atgctacctcctactgcctctgttcctgcagctctcaagatgtatgaagaagcatttcag
gacccaattgaaggagaaaagtatgcttgtagtcctttaccaccctatttagaagattct
gggataagcatggaagaagactttttggaagaagagagagagaggagaccacttcgagat
gtgtgcttccatctcttaaaactgtacagtgacagacattatgagctctatcagttgctt
gatcctagcagcgtgacttctgaccccttggactaccgcctcagttggcacttgtggaca
gtactgcaagccttgaactacacccatttatcagagcaaagccagggagtactgcatgcc
agttacgctgcccagctggagaatgtgggactgtggcaatgggcgatttttgttctttta
cacatcacaaatacacagatgcgtgagagggcagtgcgtgagctactgaaccgtcactgc
accctgtctgagacaccagagtcccatgataaggaagacttcctggtaaagaggctcagt
gttcctgcatcctggattcatgaagccaaagctatgcgagccaggaaggaaggcgacaag
cacaaggaagctttgtacctttccaaagccggacattggaaccagtgtcacaaactggtc
actcggcatctagcatcggatgccatcattaatgagagatatgaatacctgaagggattc
ctggaacacttggcgtcgcctgagcacagtaccctcatacaagactgggacactgcaggg
atggtttatttggactatatctatattattgagatgcttaaccggattaagcaggaattt
tcagggtacgagttggagaggttgcacacaaaagtgacatctctttgcagccgaatagaa
catttgcagtgccacaatgccaaggaccgcctagctcagtctgaaatggccaagcgcatc
gccaacattctccgggttgtcttgagtctacagcactcacctgaatccacatctgactct
accccagatctccagagagttccacttcgcctgcttggcccccacattggtcggcttcct
atgccagaggactatgccttggaggaattgcgcagtctcacgcagtcttatttacgagaa
ctgacagtctgcggtcagtga
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integrated database retrieval system
