Pleurodeles waltl (Iberian ribbed newt): 138249996
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Entry
138249996 CDS
T10800
Symbol
CYFIP1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04810
Regulation of actin cytoskeleton
pwl05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
138249996 (CYFIP1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
138249996 (CYFIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwl03019
]
138249996 (CYFIP1)
Messenger RNA biogenesis [BR:
pwl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
138249996 (CYFIP1)
Factors involved in mRNA localization
Other mRNA localization factors
138249996 (CYFIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
zf-CW
Motif
Other DBs
NCBI-GeneID:
138249996
NCBI-ProteinID:
XP_069060389
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All DBs
Position
8:complement(420236833..420783629)
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AA seq
1301 aa
AA seq
DB search
MVPPLDCQSLQNSFPIATPYPSLVEVGKSRKQSGEFGFLKFSGRRSATMAAQVTLEDALS
NVDLLEELPLPDQQPCIEPPPSSLLYQPNFNTNFEDRNAFVTGIARYIEQATVHSGMNGM
LEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVTKLMNFMYFQRTA
IDRFCAEVRRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCSVKNDHSAYKRAA
QFLRKMADPQSIQESQNLSMFLANHNKITQSLQQQLEVIAGYEELLADIVNICVEYYDDK
MYLTPGEKHMLLKVMGFGLYLMDGSVSNIYKLDAKKRINLSKIDKYFKQLQVVPLFGDMQ
IELARYIKTSAHYEENKSRWTCTNSSSSPQYNICEQMIQIREDHMRFISELARYSNSEVV
TGTGRQEAQKTDAEYRKLFDLSLQGLQLLSQWSAHVMEVYSWKLVHPTDKYSNKDCPDNA
EEYERATRYNYDSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTIYAALQDFAQVTL
REPLRQAIKKKKNVIQSVLQAIRKTVCDWEAGREPFNDPALRGEKDPKSGFDIKVPRRAV
GPSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTIMDIEKFHRESFFYTHLINFSETL
QQCCDLSQLWFREFFLELTMGRRIQFPIDMSMPWILTDHILESKEASMMEYVLYSLDLYN
DSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKVLAGSLLLDKRLRSDCK
NQGATIPSPPSNRYETLLKQRHVQLLGRSIDLNRLITQRITAAMYKSLELAIGRFEGEDL
TSIVELDGLIEINRMTHKLLSRYLTLDSFDAMFREANHNVSAPYGRITLHVFWELNYDFL
PNYCYNGSTYRFVRTVLPFSQEFQRDKQPNAQPQYLHGSKALNLAYSTIYSNYRNFVGPP
HFKVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVRTLMEVMPKICRLPRHEYGSPGI
LEFFHHQLKDIVEYAELKTVCFQNLREVGNAILFCLLIEQSLSLEEVCDLLHAAPFQNIL
PRIHVKEGERLDAKMKRLESKYAPLHLVPLIERLGTPQQIAIAREGDLLTKERLCCGLSM
FEVILTRVRSFLDDPIWQGPLPSNGVMHVDECVEFHRLWSAMQFVYCIPVGAHEFTVEQC
FGDGLHWAGCMIIVLLGQHRRFDVLDFSYHLLKVQKHDGKDEVIKSVPLKKMVERIRKFQ
ILNDEIFTILDKYLKSGDGEGTPVEHVRCFQPPIHQSLASN
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atggtaccgcccctagactgtcaatcactgcaaaatagctttccgattgccactccctat
ccttcacttgttgaagtcgggaagagtcgaaagcaaagcggagagtttggatttttaaag
ttctcagggcgccggagtgccactatggctgcccaagtgactctcgaggacgccttgtct
aacgtggaccttttggaagaattgccattacctgatcagcaaccgtgcattgaaccacca
ccatcatccctcctttaccagcctaacttcaacactaattttgaagaccgaaatgctttt
gtcaccggcattgcacgatatattgagcaagccactgttcattctgggatgaatgggatg
cttgaagaggggcaagaatatgctgtcatgttgtacacatggagaagctgttcgagagct
attccacaggtgaagtgtaatgaacagccaaaccgagtggagatttatgagaagacagtg
gaggtgttggaacctgaagttaccaagctgatgaattttatgtactttcagaggactgcg
attgaccgtttctgtgctgaggtcagacgtttgtgtcatgctgaaaggagaaaagacttt
gtgtcggaggcctaccttcttactttgggcaagttcatcaacatgttcgcagttttagac
gagctgaaaaacatgaaatgcagtgttaaaaacgaccactctgcatacaaaagagctgct
cagtttttgcgtaaaatggcagatccacagtccatccaggaatcacagaacctctccatg
tttctagcaaatcacaataagatcactcagtctctgcagcagcagcttgaagtgattgct
ggctacgaagagctcctggctgatattgtaaatatttgtgtggagtactatgatgataag
atgtatctaactcctggtgaaaagcacatgctgttgaaggtcatgggctttggcttgtac
ctgatggatggaagtgttagcaatatctacaaactggatgccaaaaagcggataaaccta
agcaaaatagacaaatactttaagcaactccaggtggttccactctttggagacatgcag
atagagctggcaagatatatcaagacaagtgcccattatgaggaaaacaagtccaggtgg
acctgtaccaactcaagcagcagcccacagtacaacatctgtgagcagatgattcaaatc
cgagaagaccatatgcgatttatttcagaactggctcgttacagcaacagtgaggttgtg
accggaactggccgccaggaagcccagaaaacagatgcagagtatcggaagctcttcgac
ttgtctcttcaagggctgcagctactctcccagtggagtgcccatgttatggaagtgtat
tcttggaagttggttcatcctactgataagtactccaacaaggactgcccagataatgca
gaggagtatgaaagagcgacaaggtacaattacgacagtgaagagaagtttgcacttgta
gaggtcattgctatgattaaaggactgcaggtgctcatgggaaggatggagagtgttttc
aaccatgctatccgccacacaatttacgctgcccttcaggactttgcacaggtcactttg
cgagaacccctacggcaagccataaagaagaagaaaaatgtaattcagagcgtacttcag
gctatcaggaagactgtatgtgactgggaagcaggacgtgaaccatttaatgatccagca
ttaaggggagagaaagaccctaaaagtggctttgacatcaaagttccaagacgagcagtg
gggccgtctagcactcagctgtacatggtgagaactatgttagaatccctcattgctgac
aaaagtggctccaagaaaactttgcgaagtagccttgagggacccaccataatggatata
gagaaatttcaccgcgagtctttcttctacacacacttgataaatttcagtgaaactcta
cagcagtgctgtgacctgtcccagctgtggttcagagagttctttctggagctgactatg
ggaaggcggatccagttccctattgacatgtccatgccttggattctgactgaccacatc
cttgagtccaaagaagcatccatgatggagtatgttctctattccctggacctgtacaat
gatagtgcccattatgcactgacaaagttcaagaagcagttcttatatgatgaaatcgaa
gctgaggtgaacttgtgttttgatcaatttgtctacaagctagctgatcaaatatttgcc
tattataaagttctggctggaagtcttcttctagacaagcggcttaggtctgactgtaag
aaccaaggagcgactattccatcaccaccgtccaaccgttatgagacactgctaaagcaa
agacatgtgcagcttttagggaggtcaatagatctaaaccgccttattactcagaggatt
actgcagctatgtacaagtcactggaactggcgattgggcggtttgaaggtgaagacctg
acttccatagttgagctcgatgggctgattgaaatcaaccgtatgacgcataaactactg
agtcgatacttgacattggacagctttgatgctatgttcagagaagccaaccacaatgtg
tcagccccttacggcagaatcactctccatgtcttctgggagctcaactatgactttctc
ccaaactactgctacaatgggtccacatacagatttgttcgaactgtgcttccattttct
caggaatttcaaagagacaagcagccaaatgcacagccgcagtatcttcatggttcaaag
gccttgaatttggcttatagcaccatttacagcaactacagaaactttgttggcccacct
cattttaaagtcatctgccgcctccttggataccagggcattgcagtggtgatggaggaa
ctgttaaaggtcgtcaaaagcttgctgcaaggcacaattctgcagtatgtcagaacattg
atggaagtgatgcctaaaatctgtagattgccaaggcatgagtatggctcaccaggtatc
ctggagtttttccaccatcaactgaaggacatcgttgagtatgcagaactcaagactgtg
tgttttcagaacctgcgagaagttgggaacgctatacttttctgcctcctcatagaacag
agtctgtcattagaagaagtatgtgatctgttgcatgctgcaccattccagaatatattg
cctaggattcacgtaaaggaaggtgaaaggcttgatgctaaaatgaaacgactagaatca
aaatatgctccactccatcttgttcctctgattgaaagattgggaacaccccagcaaatt
gcaatagcaagagaaggggatttgctgacgaaggaacgcctttgctgtggtttgtccatg
tttgaagtcattctgaccagggttcggagtttcttggatgatccgatttggcaaggacct
ctacccagtaacggtgtgatgcatgtggatgagtgtgtggaatttcaccgtctttggagc
gccatgcagtttgtctactgtattcctgttggagcccacgagtttactgtggagcagtgt
tttggagatgggctccactgggccggatgcatgatcattgtgctattggggcagcatcgc
cgctttgatgttcttgatttctcttaccacttactgaaagtgcagaaacatgatggcaaa
gatgaagtcattaaaagcgtgcccctgaagaaaatggtggagagaattcgcaagtttcag
atactaaacgatgagatcttcaccatcttggacaagtacctgaaatctggtgatggagaa
ggcacccctgtggaacatgtccgttgtttccagccacctatccaccagtcgttggcaagc
aactag
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