Pleurodeles waltl (Iberian ribbed newt): 138250062
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Entry
138250062 CDS
T10800
Symbol
TGFBRAP1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04148
Efferocytosis
Brite
Membrane trafficking [BR:
pwl04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
138250062 (TGFBRAP1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
Motif
Other DBs
NCBI-GeneID:
138250062
NCBI-ProteinID:
XP_069060547
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Position
8:complement(488979691..489201319)
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AA seq
869 aa
AA seq
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MSVKAFQLACLVERELLAASVVSADKSRQQLRIESLECCGHDLYLGSSDGCIRRFLVEEK
SHAATGLTTFTASQQLQRTLLGPRKPVTELRAASALHRLLVLCDNVISLADMTSLEPVAA
AGARIKGAAAFTLNENPASGGDPFCVELCLISAKRRAVQIFMVYEDHVQIVKEVMTPEQP
CSLAVDGHFLCLALTTQYIIMNYNTGSSQDLFPYNSEEKRPIVKRISRQEFLLAGPGGLG
MFATVAGISQRAPVRWSENVIGAAVCFPYVVALDEEFITVHSMLDQQKKQTIPFKEGRIL
QEFEGKLIATTDNGVYVLTPVPLEKQIQDLLAGRRVEEALVLAKGARRNIPKEKFQVMYR
RILQQAGFIQFAQLQFSEAKELFRSSHLDVRELISLYPFLLPTSSTFARCHPPLHEYADL
NQLTQGDQDKIGKCKGFLMSYLNEIRSTEVANGYKEDVDTALLKLYAEANHESLLDLLVS
ENSCLLTDCAAWLETHKKYYALGLLYHYNSQDAAALQLWVKIVNGDLQDPTRTDLFDYIV
DFLTFCTDHDLVWKYSEWVLQKSEQIGVQIFTRRPCDEQQRNGFCPDDVIKCLRKYPRAI
LKYLEHLVLDRRFQKEKYHTHLAVMYLEEVQRLKSLALENCEEMVECQTKFRSLLQQSDL
YRVHLLLDKIKNTDLHLESAILYGKLEEHDKALNILVHRLKDFPAAEDYCLWNSVNKDAA
YRQRLFNLLLHIYLNSGSSDGSLQVAGVDLLNKHASEFNTTEVLRQLPETWSVQLLAPFL
AGSMRESIHNQTMAQLAVGLAKAENLIYKNEKVKMRGRPIVLSDKQLCQICQSPFSEPTF
VRHPNGIIVHTHCAASRRMNPNMAHGTRT
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcaaggcctttcagttggcgtgcctcgtagagcgggagctcctggcggcatca
gttgtctcggctgataagtcccggcagcagcttcgcatcgaaagccttgaatgctgcggg
catgacttatatctgggttcaagtgatggctgcattcgtcgcttcctggtggaggagaag
agccacgcagccacgggactgacaacttttactgcctcccagcaactgcagcgaacattg
ctgggcccaagaaagccagttacagaactccgtgccgcttcagcattgcaccggcttctg
gttttgtgtgataatgtcatcagtcttgctgacatgactagtctggagccagtggctgct
gccggggcccgaataaagggtgccgctgcattcaccctcaacgaaaaccctgcaagcggt
ggagatcctttctgcgtagagctgtgcctcatctctgccaagcgccgtgccgttcagata
ttcatggtttatgaggatcacgttcagatcgtcaaggaagtgatgactcctgaacagccc
tgctctcttgccgtggatggacactttttgtgcttggcccttaccactcagtacatcatt
atgaattacaacactggctcttcccaggatctcttcccttacaacagcgaggagaagcgg
ccgatagtgaagcgtataagcaggcaggagttcttgctggccggtcccggtggattaggt
atgtttgcaacagtagcagggatttcccagcgtgctcctgttcggtggtcagagaatgtt
attggtgcagcagtctgctttccgtatgtggtagcgctagatgaagaatttattactgtg
catagtatgctggaccagcagaagaaacagaccatcccattcaaagagggtcgcattcta
caggaatttgaaggaaagttgatagctaccaccgataatggggtgtatgttttgacaccg
gtccctttggaaaagcagattcaggaccttcttgctggccgtcgggtggaagaagctctt
gttttagctaagggtgcacgcaggaacattccaaaagaaaaatttcaggttatgtacaga
cggatcctacaacaggcaggattcatacaatttgcacagcttcagttttcagaagcaaaa
gaacttttcagaagcagtcatcttgatgtccgtgagctgatctctctgtaccccttccta
ttgcccacgtcttcaacatttgctcgctgtcaccctccacttcacgagtatgccgacttg
aatcagctgactcaaggggaccaagacaagattggcaagtgtaaagggtttctaatgagc
tacttgaatgagatccggagtacggaagtggctaacggctacaaggaagatgtagatacg
gccttgctgaaactgtacgccgaagcaaaccatgaaagtcttctggatctcctggtttct
gagaattcctgccttttaaccgactgtgctgcatggcttgaaacacacaaaaagtactat
gcacttgggcttctgtatcattacaatagtcaggatgctgctgcactccagctgtgggtg
aaaatagtgaatggagaccttcaagatccgacccgaactgacctctttgactacatagtg
gatttcctcactttttgcacagaccatgacttggtgtggaagtattcagaatgggtttta
cagaaaagtgagcagattggtgttcagattttcactagaagaccttgtgatgaacagcag
agaaatggcttttgtcctgatgatgtaatcaaatgtcttaggaaataccccagagcaata
ctgaaatatctcgaacatttagttcttgacagaaggttccagaaagagaagtaccacaca
catttagctgttatgtacttggaggaagtccaacggctaaaatccttggctctggagaat
tgtgaagaaatggttgaatgtcaaactaaattccgaagtttacttcaacagtctgatctc
tacagggttcaccttctcttagataaaataaagaatactgatcttcatctggaaagtgca
attttatacggtaagctggaagaacatgacaaagctctgaacatacttgtccaccggcta
aaagacttccctgctgctgaggactattgtctgtggaactctgtgaataaagatgccgcc
taccggcagagactgttcaatctcttgctccatatctacttgaattcaggctcctctgat
ggctcactgcaggtggctggtgtggaccttttaaacaaacatgcctctgagttcaacaca
actgaggttttgagacaattgcctgaaacatggtcagttcagctgcttgctccgtttttg
gctggatccatgagagagagcattcataaccaaacaatggcccagcttgctgtgggattg
gcaaaagctgaaaaccttatatacaaaaacgagaaggtgaagatgagaggtcgtccgata
gtgctctctgacaagcagctatgtcagatttgccaaagtcccttcagtgagccaacgttt
gtcagacacccgaatggcatcattgttcacactcattgtgctgctagcagacgcatgaat
cccaacatggcccacggcacccggacttga
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