Pleurodeles waltl (Iberian ribbed newt): 138250085
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Entry
138250085 CDS
T10800
Symbol
EDAR
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR isoform X1
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
138250085 (EDAR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
pwl04050
]
138250085 (EDAR)
Cytokine receptors [BR:
pwl04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
138250085 (EDAR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Death_EDAR
TNFR_c6
CLN3
PFF1_TM
PspB
DUF4548
Motif
Other DBs
NCBI-GeneID:
138250085
NCBI-ProteinID:
XP_069060590
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Position
8:complement(512127017..512465202)
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AA seq
453 aa
AA seq
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MAQEEEHRRIRVFRLLMISLVYSVHAEHSNCGENEYYNQTTGLCQSCPECEPGEEPNMTC
GYGAKDDDYGCTPCPAGKYSRGGYQMCRRHKDCEGFYRATVLTHGNAEKDSECGPCLPGH
YMLENRPRNSYMMVCYSCSLAPPNIKECMSASSVLSASVTTSSTTNTLPPLHHAQKAELP
GQGHLANALIIAMSTIFIMAVAIVLIIMFYIVKAKPSSQACCTLQSVKTVEAQTNKPEEK
KEAQENVIYTEKEEFEKHPETPVKTEKNENDASSENEQLLSRSIDSDEDAAFEKQLTADL
CLLSLVHLAKEKNSTHSKLTVIQSRRKKILNLYANACGVAEGLSPTELPFDCLEKTSRML
SATYNTEKAVVKTWRHLAESFGLKRDEIGGMTDGLQLFDRISTAGYSIPDLLTRLVQIER
LDAVESLCADILEWAQSTPPTPEPTLPSRCQSL
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcccaggaggaggagcacagacggatccgtgttttccgactcctcatgatatcgctg
gtatactctgtccacgcagagcactccaactgtggtgaaaacgagtattataaccagacc
acggggctgtgccagagctgcccagagtgtgaaccaggagaagagcccaacatgacgtgt
gggtacggagcaaaagatgacgactacggatgtacgccttgtccggcgggcaagtattca
agaggaggctaccagatgtgtagacgccacaaggattgtgaaggcttctatcgtgccacc
gttctgactcatggcaatgcagagaaggactcggagtgcggcccttgcctccctgggcac
tatatgctcgagaaccggcctaggaacagctatatgatggtttgctactcgtgttcactg
gcaccaccaaatatcaaggaatgtatgtcagcctcctcagtcctctcagccagtgtcacc
actagcagtaccaccaacacactaccaccgctccatcatgcacagaaagcagaacttcca
ggacagggtcacctggccaatgccctcattattgctatgtcaacaatatttatcatggct
gtggcgatcgtactcatcatcatgttctacattgtaaaggcaaagccatcctctcaagca
tgctgtaccctccagtcagtgaaaacagtggaagcccagacgaataaaccagaagaaaaa
aaggaagctcaagaaaatgtgatatacacagagaaggaagaatttgaaaaacatccagaa
acacctgtaaagacagagaaaaatgaaaatgatgcatcatcagagaatgaacaacttttg
agccgcagcattgacagcgacgaggacgctgcctttgagaagcagctaaccgcagaccta
tgtcttttatccctggttcatttggccaaggaaaaaaattctacgcacagcaaactaaca
gtgattcaaagtcgaagaaaaaagattctgaatctctatgctaatgcatgtggtgttgca
gaaggcctaagccccacagagcttccctttgactgcctggagaagaccagtaggatgctc
agtgctacgtacaacacagaaaaggctgttgtcaaaacgtggcgacacctcgcagagagc
tttggactcaagagggacgaaatagggggaatgacggacggactgcagctgtttgatcga
atcagtactgctggctatagcattccggaccttctgacgaggctggtacaaatagagcga
ctcgatgctgttgagtccttatgtgcagacattttggagtgggcccagagcacaccgcct
acgccagaaccaactctcccatccagatgccaaagcttatga
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