Pleurodeles waltl (Iberian ribbed newt): 138250103
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Entry
138250103 CDS
T10800
Symbol
RBBP7
Name
(RefSeq) histone-binding protein RBBP7
KO
K11659
histone-binding protein RBBP7
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03082
ATP-dependent chromatin remodeling
pwl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
138250103 (RBBP7)
03083 Polycomb repressive complex
138250103 (RBBP7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pwl03036
]
138250103 (RBBP7)
Chromosome and associated proteins [BR:
pwl03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
138250103 (RBBP7)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
138250103 (RBBP7)
PRC2.2
138250103 (RBBP7)
Chromatin remodeling factors
NuRD complex
138250103 (RBBP7)
NuRF complex
138250103 (RBBP7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
EIF3I
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD_LRWD1
WD40_RFWD3
Beta-prop_RIG_1st
ANAPC4_WD40
Beta-prop_DCAF12
eIF2A
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
MIOS_WD40
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
138250103
NCBI-ProteinID:
XP_069060637
LinkDB
All DBs
Position
8:524525974..524614029
Genome browser
AA seq
424 aa
AA seq
DB search
MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTRPEGKDY
ALHWLVLGTHTSDEQNHLVVARVQIPNDDAQFDASHYDSEKGEFGGFGSVTGKIETEIKI
NHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEGY
GLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAIFTGHSAVVEDVAWHLLHES
LFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW
DLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSSEDAED
GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAPSEL
EAQG
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggccagtaaagaaatgtttgaagacaccgttgaggagcgggtgatcaatgaggagtac
aagatctggaagaagaacacccctttcctgtatgacctggtcatgacgcatgctctggag
tggccaagtcttacagttcagtggctgccagatgtgactaggccagaaggaaaggactat
gcactccattggcttgtactagggacccacacttctgacgagcagaatcatttggtggtt
gcacgagtacagattccgaacgatgatgctcagtttgatgcgtctcactacgatagtgag
aaaggagagtttggaggcttcggatctgtaactggcaaaattgaaactgagatcaagatc
aaccatgaaggcgaggtgaatcgggctcggtacatgccacagaatccctgcattatcgct
acaaagacaccctcctctgatgttttggttttcgactacaccaaacacccttcaaagcca
gatccaagcggcgagtgtagcccggacctgcggttaagaggtcaccaaaaagaaggttac
ggcttatcttggaattccaacttaagtggacacctcctgagtgcttcagacgaccatact
gtatgtttgtgggacataagcgctggaccaaaagaaggcaaggttgttgatgcaaaggct
atttttactggccattccgctgtggtcgaagatgtggcttggcacctgcttcacgagtca
ctgtttgggtctgttgcagatgatcagaagctgatgatttgggataccaggtctaacacc
acgtcaaagccaagtcattctgtggatgctcacacagcagaagtcaactgcctgtccttt
aatccatacagcgagttcatcctagccaccggttctgcggataagacggtggcattgtgg
gatctccgaaatttgaaattaaaacttcattcctttgagtcgcacaaggatgagatcttt
caggttcactggtctcctcacaatgaaacaattcttgcttcaagtggaacagaccgaagg
cttaatgtatgggatttgagtaaaattggagaagagcagtcctctgaagatgcggaggat
ggaccacctgaacttttgtttatccatggaggtcacacagcaaagatttcagatttcagt
tggaatcccaatgaaccatgggtgatttgctctgtatcggaagacaatatcatgcagatc
tggcagatggctgaaaacatatacaacgatgaagaacctgacatagcaccatcagaacta
gaagctcaaggatga
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