Pleurodeles waltl (Iberian ribbed newt): 138250350
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Entry
138250350 CDS
T10800
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pwl03000
]
138250350 (SOX1)
Transcription factors [BR:
pwl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
138250350 (SOX1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
138250350
NCBI-ProteinID:
XP_069061234
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All DBs
Position
8:845282405..845285513
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AA seq
367 aa
AA seq
DB search
MYSMMMETDLHSPGAQPPANTGQSGGGSGGGTGGAKANQDRVKRPMNAFMVWSRGQRRKM
AQENPKMHNSEISKRLGAEWKVMSEGEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTL
LKKDKYSLAGGLLSAGGGPGGMGVGLSPGGVGQRLESPGGGSGGGGGYAHMNGWANGGYP
GSVAAAAAAAMMQEAQLAYSQQQQQHHHPHHPHHAHHHPHQPQPMHRYDMGALQYSPLGS
QGYMSASPSGYALSYSGGQAGGQPPQGGSATSASSASGALGALGSLVKSEPSVSPPVSGT
AVHPSARAPCPGDLREMISMYLPAGEAAEAAAAGGRLLHGLSQPQQQAHYHHHHQSAVNG
TVPLTHI
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagacggacttacactccccaggggcgcagcccccggccaac
accggccagagcggcggcggtagcggcgggggtacggggggcgccaaagccaaccaggac
agggtgaaacgacccatgaacgctttcatggtctggtcgaggggccagcggcgcaagatg
gcccaggagaaccccaagatgcacaactcggagatcagcaagcgcctgggcgcagagtgg
aaggtcatgtcagaaggcgagaagcggcccttcatcgacgaggccaagcgcctacgggcg
ctgcacatgaaagagcacccggactacaagtaccggccccggcgcaagaccaagaccctg
ctgaagaaggacaagtactcactggccggggggctgctctccgccggcggtggccccgga
ggcatgggcgtgggcctgagccccggtggcgtgggccagcgccttgagagccctggtggc
gggagcggcggaggcgggggctacgcgcacatgaacggctgggccaacgggggctacccc
ggctcggtggcggcggcggcggccgcggcgatgatgcaggaggctcagctcgcctacagc
cagcagcaacagcagcaccaccaccctcaccacccgcaccacgcgcaccaccacccgcac
cagccgcagcccatgcaccgctacgacatgggcgcgctgcagtacagccccctgggctcg
cagggctacatgagcgcctcgccctcggggtacgccctctcctacagtgggggccaggcc
ggggggcagccgccgcagggtggctcggccacctccgcctcttcggcttcgggcgccctg
ggggccctgggctccctggtgaagtcggagcccagtgtcagccctcccgtcagcggcacc
gcggtgcacccctccgcccgggcgccgtgccccggggacctgcgggagatgatcagcatg
tacctgccggcgggggaggcggctgaagcagcagcggccggggggaggctcctgcacggc
ctgagccagccgcagcaacaggcgcactaccaccaccaccaccagagcgcggtgaacggc
acggtgcccctcacgcacatctga
DBGET
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