Pleurodeles waltl (Iberian ribbed newt): 138250411
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Entry
138250411 CDS
T10800
Symbol
TBC1D4
Name
(RefSeq) TBC1 domain family member 4 isoform X1
KO
K17902
TBC1 domain family member 4
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pwl04131
]
138250411 (TBC1D4)
Membrane trafficking [BR:
pwl04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
138250411 (TBC1D4)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
138250411 (TBC1D4)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
138250411 (TBC1D4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
DUF4249
ApoLp-III
TEDC1
Motif
Other DBs
NCBI-GeneID:
138250411
NCBI-ProteinID:
XP_069061378
LinkDB
All DBs
Position
8:999279492..999879326
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AA seq
1282 aa
AA seq
DB search
MDSKGGSTMESRTSCADLFHPLLQEDEKPNKPADKQFRLWYVGWSSLDRRTTLPMLPWLM
AEIRRRSERQELPGCSAPSREVQLLLGTPHLRCVPVACSVTNPAVFIFEHKAQHISRFIH
NSTDLTYFAYLIKAQPDNPESEMACHVFKATDPNQVPDVISSIRQVSKVALKEDSKTSKD
GEDAFYNSQKFEVLYCGKVTVAHKKAPSTLIDDCIEKFSQHERQRLKLLSEQRSNDLCTD
LPLTEGDGPCSPVDSPFEELECDNGNARTTGHSPIFTVGSQTNLAGNRVTFHERILEDSG
FDDQQEFRSRCNSVTGVMQRRVHDASVKIPPRRRHASAPSHVQPSDSEKNRTMLFQVGRF
EVNLISPDTKTVELEKNFKDISSCSQGIRHIDHFGLVCRECIEPGINQYVCYVFQCASEA
LVDEVMLTLKQAFSTAAALQNAKTQIKLCEACPMHALHKLCERIEGLYPPRAKLVIQRQL
SLLSDNEQADIFERVQKMKPVTDQEENELVILHLRQLCEAKQKAHLHIGETPSNVLNSAI
PENAAPSGRFKLDILKNKARKSLTSSLENIFSRGANRMRGRLGSIDSFERCNSFASDRDC
SPGDSPPATPPASPVSSLWLPFAEEEEPDSPQFRRRAHTLSHLPLSSNSKRRITFPDTRS
TSTRSPLQRQNSLASDAPQSSPVPIARRVRHDSDSASSSLPSSFSAPSFLKGFYQSSGRL
LQQSEGEASKSDWEGRRRTLSGCSNDSLNAGPVTPRRVSWRQRIFLRVASPMNKSSPSAM
QQKERFDGSELLPLSPFAPAMEELDSLSQDDDAPEQDGGSRNSEDLQRLWRKAIHQQILL
LRMEKENQKLEASRDELQSKKVKLVYEEICQKDVSTLWDKKLNCRTKIRCDMEEVLASLK
EGVPKSRRGEIWQFLAMQYRLRHRLSNKQSPPDISYKELLKQLTAQQHAILVDLGRTFPT
HPYFSAQLGAGQLSLFNLLKAYSLLDEEVGYCQGISFVAGILLLHMSEEQAFETLKFLMY
DLGFRKQYRPDMVSLQIQMYQLSRLLHDYHRELYNHLEENEISPSLYAAPWFLTLFASQF
PLGFVARVFDIIFLQGTEVIFKVALSLLRNHEALIMECESFEHIVDFLKTTIPDMTKSKM
ETIITQVFEMDISKQLHAYEVEYHVLQDEMHEASNTCDESEPLHKLERMNSQLKRQNMDL
VEKLQVAQSKIQSLESNVESILSRENKTRNLLRSLEQEKAAYQKTIEMMKKYLPDEALAD
CELLMRETNCSPNNKTKPGNKP
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atggactctaaggggggttccaccatggagagtcgaaccagttgtgcggatctgttccat
cctctgctgcaggaagatgagaaaccaaacaaaccagctgacaagcagttcagactctgg
tatgtggggtggtcttcactggatcggaggaccactttgccaatgcttccctggctgatg
gcagagatccggcggcgaagtgagaggcaggagttgcctgggtgcagcgccccgagtcgg
gaggtgcaattgctgctgggcacccctcacctgcgctgtgttcctgtggcctgcagtgtt
acaaacccagcagtcttcatttttgagcacaaggcccagcacatctcgcgcttcatccac
aacagcactgacctcacctactttgcgtacctgataaaggctcagcccgacaacccagaa
tctgagatggcatgccatgtcttcaaggccacagaccccaatcaggttccagacgttata
agcagtatcaggcaggtctctaaagttgctttgaaagaggactctaagaccagtaaagac
ggtgaagatgctttttacaactctcaaaagtttgaggttctgtattgcggaaaagtgact
gtggctcacaaaaaagctccctctacgctaattgatgactgcattgagaaattcagtcag
catgagcgccagcggcttaagctgctgagtgagcagcggagtaatgatttgtgcacagat
ctaccactaactgaaggggatgggccttgttctcctgtggacagtccgtttgaggaactt
gagtgtgataatggcaatgccaggacaactggtcattcaccgatatttaccgttggcagc
cagacaaacctggctgggaaccgggtcaccttccatgagcgaattttggaggactctggt
tttgatgatcaacaagagttccgttccaggtgcaacagtgtaactggggtcatgcagagg
agggtccatgatgccagtgttaaaatacctccccgccggagacatgcaagtgcacccagt
catgtacagccctcggattcagagaagaacagaaccatgctcttccaggttggtcggttt
gaagttaacctcatcagccctgacactaaaactgtggagcttgaaaagaactttaaagat
atctcctcttgctctcagggtataaggcacattgatcattttggcctggtctgtcgcgaa
tgcatcgaaccaggcataaatcagtatgtctgttatgtgttccagtgcgcgagcgaggct
ctggtcgatgaggtgatgctgactctaaaacaagcttttagcactgctgctgctctacaa
aatgccaaaactcagatcaagctgtgtgaagcctgtcctatgcacgcactgcacaaacta
tgtgaacgcattgaaggtctgtaccctccaagagccaaactcgtaatccagagacagctg
tcattgctatcagacaatgagcaagcagatatttttgagcgtgttcagaaaatgaagcct
gtgacagaccaagaggaaaacgagctggtgattctgcatctgaggcagctgtgtgaagcc
aaacagaaagcccatcttcatattggagagacaccatcgaatgttttgaacagtgccatt
cctgaaaacgctgctcccagcggaagattcaagttggacattctgaaaaataaagccaga
aaatccttgaccagctctttggaaaatatcttctccaggggtgctaacaggatgagaggt
cgtcttggaagcatagacagctttgaacgttgcaacagttttgcgtcagatcgggactgc
tcaccaggggactctcctccagccacccctcctgcatcgcctgtgtcctcgctctggctg
ccgtttgctgaagaagaagagcctgactcgccacagtttcggagacgtgctcacacactc
agccacttgccattgtcttccaattccaagagacggataacttttccagacacaaggtcc
acaagcacacggtctccccttcagaggcagaactcccttgctagcgatgcaccccaaagc
agccctgtgcccatcgcgcgacgcgttcgccatgacagcgactccgcgtcctccagcctc
ccctcgtccttctctgccccctctttcttgaagggcttttaccagagctcggggcggctg
ctccagcagtccgagggtgaggcctccaagagtgactgggaggggcgaagaaggactttg
tctggctgtagcaatgactctttaaatgctggacctgtcaccccccgtcgtgtctcttgg
cgacagcgaatattcctgagggtggcttcacccatgaacaagtcttctccctcggcaatg
cagcaaaaagaacggtttgatgggagtgagttgctgcccctgtcccctttcgcgccagcc
atggaggaactcgattccctgtcacaggacgatgacgctccagaacaagatggaggcagc
aggaattctgaggatctgcagagattgtggaggaaagctatccatcagcagatcctgctg
ttgcggatggagaaggaaaaccagaagctagaagcaagcagagatgaacttcaatccaaa
aaagtgaaattggtctatgaagagatttgtcaaaaagatgtttccactctctgggataag
aaattgaactgccgaaccaagataaggtgtgatatggaagaagttcttgccagcctgaaa
gaaggagtaccaaaaagtcgtaggggagaaatatggcagttcttagctatgcagtaccgc
ctccgacacagactgtccaacaagcagtccccacctgacatttcctacaaggagcttctg
aagcagttgacagctcagcaacatgctattcttgtagaccttggtcggactttcccaact
cacccttacttttctgcacagctaggagcgggacagctctccctgtttaatctcctgaaa
gcctattccttgctggacgaggaagtgggctattgccaaggcatcagttttgtggctggc
attcttcttctgcacatgagtgaagagcaagcctttgaaacgttgaagttcctcatgtat
gacttgggcttccgtaaacagtaccgacctgatatggtgtccctgcagattcaaatgtac
cagctgtccaggcttctccatgactatcaccgagaactgtataatcacctggaggagaat
gagatcagccctagtctttatgctgctccttggtttttgacgctcttcgcttctcagttt
ccactggggtttgttgccagagtgtttgatataatttttcttcaaggtaccgaagtgatt
tttaaggttgcacttagtctacttagaaaccacgaggcactaataatggaatgtgaaagc
tttgagcacattgtagattttcttaagaccaccataccagatatgaccaagtcaaagatg
gaaaccattattacccaggtttttgagatggatatttccaagcagctccatgcttacgag
gttgagtaccatgtactccaagatgaaatgcacgaagcatccaatacctgtgatgagagt
gagcccttgcacaaactagaacggatgaacagccagctaaagagacagaacatggatcta
gtggagaaactacaggtggctcaatcaaagattcagagcttggaatccaatgttgaaagc
attttgtcccgggagaataaaacgaggaatcttctacgatcactcgagcaagagaaggca
gcctatcaaaagactattgaaatgatgaagaaatatttgccggacgaagcactcgccgac
tgtgaactactgatgagggaaaccaactgcagcccgaacaataaaacaaagccaggaaat
aagccataa
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