Pleurodeles waltl (Iberian ribbed newt): 138250422
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Entry
138250422 CDS
T10800
Symbol
PCDH9
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
138250422 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pwl01009
]
138250422 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pwl04515
]
138250422 (PCDH9)
Protein phosphatases and associated proteins [BR:
pwl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138250422 (PCDH9)
Cell adhesion molecules [BR:
pwl04515
]
Cadherins
Protocadherins
138250422 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Big_9
Cadherin_4
V_ATPase_I
DUF6377
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
138250422
NCBI-ProteinID:
XP_069061397
LinkDB
All DBs
Position
8:1034404552..1034760362
Genome browser
AA seq
1041 aa
AA seq
DB search
MDLRDFYLFAALIACLRLDSAIAQELIYTIREEMPENFPIGNIPKDLNISHINAATGTGA
SLFYKLVSKAGDAPLVKVSSSTGEIFTTSAKIDREKLCPGAAYSEENECFFELEVVILPN
DYFRLIKIKIIVKDTNDNAPMFPSTVINISIPENTLINSRFPIPSAADPDTGDNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQSLDREQKDTYVMKIKVQDGGDPQKSSTAILQV
TVSDVNDNKPVFKESQIEVHIPENAPPGTSVIQLHATDADIGNNAEIRYIFGATVTPATQ
KLFALNSSSGLITVQRPLDREETSVHKVSVMATDGSSTPARATVTINVTDVNDNPPNIDL
RYIITPINGTVYLSEKDPINTKIALITVSDKDTDVNGKVICFIEKEVPFHLKAVYDNQYL
LETSAPLDYEGTREFSFKIVAADTGKPSLNHSALVRVELEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTITATDEDRGKNAELVYQLGPNASFFELDRRTGVLTASRVLDREEQERFIF
TVTARDGGTPPLQSQAAVIVTVLDENDNSPKFTHNHFHFFVSENLPKYSTVGVITVTDTD
AGENRAVTLSLLNDNDNFVLDPYSGVIKSNVSFDKEQQGSYTFDVRAVDGGHPPRSSAAR
VTINIMDVNDNSPVVLSPPSNTSFRLVPLSTIPGSVVAEVFAVDSDTGMNAELKYSIVSG
NQRGLFRIDPVTGNITLEEKPSAADLGLHRLVVNISDFGYPRALHTLVMVFLYVNETASN
ASLIQEMIRRTLETPLDRTIGGASESYQNEDYLTLMIAIVAGAMVVLVVIFVTVLLRCRH
ASRFKAAQRNKQGAEWMSPHQENKQGKKKKRRKRKAPKSSLLNFVTIEEAKADGVAREPI
NGTVSSLPAELEEQSIGRFEWGTAPPSSTFKPPASPDLAKHYKSASPQAAFHLKADSTPA
SVKKHHAIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKAKGPLHSRQDAIE
MMEGLVRRAAPSPTETTSTDA
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggatttaagggatttttacctgttcgctgccctcattgcctgcttgaggctggactct
gctatagcccaagaacttatctacaccatccgtgaggagatgcctgaaaactttcccata
ggcaacataccaaaggatctgaacatctcgcacatcaatgctgccacgggcacaggtgcc
agtctgttttacaagctggtgtccaaggcgggggatgcccccctggtgaaagtgtccagc
agcaccggggaaatcttcaccacctctgctaagatcgacagggagaagctgtgccctgga
gctgcctactcagaagagaatgagtgcttctttgagcttgaagttgtcatcttgcccaat
gactattttaggctcattaaaatcaaaattattgtgaaggacaccaacgacaatgcacct
atgttcccctccactgtgattaacatctccatccctgagaacaccctgatcaatagtcgc
ttccccatcccctctgcggctgaccccgacactggggacaatggcgtacagcactatgag
ctgctcaatgggcagagtgtctttgggctggatattgtggagacacctgaaggtgagaag
tggccacagctgattgtgcagcagagcctagaccgggaacagaaggacacctatgtaatg
aagatcaaggttcaagatggaggtgaccctcaaaaatccagtacagccatcctgcaggtc
acagtgagtgatgtgaatgataacaaacctgttttcaaggagagccagatagaggtgcac
attcctgagaatgcaccaccaggtacctcggttatccagctgcatgccacagatgcagac
attggcaacaatgctgaaatccgctacatctttggtgccactgtcaccccggctacacag
aaactttttgccttgaacagtagctctggcctgatcacagtgcagaggcctctggacaga
gaagagacatcagtgcacaaggtgtctgtgatggctacagatggcagctcaacaccagct
agagccacagttacaatcaacgtgactgatgtgaatgacaacccgcccaacatagatcta
aggtacattatcacccctatcaatggcactgtgtacctatccgagaaggatcccatcaac
accaagatcgccctgatcacagtctcggacaaggacacagatgtgaatggaaaagtgatc
tgcttcattgagaaagaggtaccattccatctcaaggctgtctatgacaaccagtacctg
ctggagacctctgctccactggactatgagggtactagggagttcagcttcaagattgtg
gcagcggatacaggcaagcccagcttgaaccattctgccctggttcgagtagagttggaa
gatgagaatgacaacccaccaatcttcagccaaccagtcattgagctctcagtttctgaa
aacaaccgccgtggcctctatttgaccaccatcacagccactgatgaggaccgtggcaag
aatgcagagctggtctaccagttgggacctaatgcatccttctttgagcttgatcggcgc
acaggtgtgcttacagcatcccgggtgctggaccgcgaggaacaagagaggttcatcttc
acggtgacagcccgtgatgggggcaccccacccctgcagagccaggctgccgtcattgtc
acggttctggatgaaaatgacaacagtcccaagttcactcacaatcacttccacttcttc
gtgtctgaaaacctaccaaagtacagcacagtgggtgtgatcactgtgactgacactgat
gccggcgagaaccgagcagtcaccctgtccctgctcaatgacaatgacaactttgttctg
gacccttactctggggtcatcaagtccaacgtgtcctttgacaaggagcagcaaggctca
tacacctttgatgtgcgggctgttgatggtgggcaccctccacgctcctcggctgccagg
gtcaccatcaacattatggacgtgaatgacaacagcccagtagtgctttcaccaccctcc
aacacctccttccgactggtaccattatccactatccctggctctgtggtagctgaagtc
tttgctgtggacagtgatacgggcatgaatgctgaactcaaatacagcattgtaagtggc
aaccagcggggcctcttccgcattgaccccgtgacaggcaacattaccctagaggagaag
cccagtgctgctgatctgggccttcatcgtctggtagtcaatattagtgattttggctac
cccagggccctgcacactctggtcatggtcttcctatatgtgaatgagacagcaagcaat
gcatccctgatccaggagatgatccgtcgcaccctagaaaccccacttgacaggaccatt
ggtggtgccagtgagtcttatcagaatgaggactaccttacgctcatgattgccattgtg
gctggagccatggtggtgctcgtggtcatctttgtaacggtgttgctgcgctgtcgccat
gcatcacgttttaaggcagctcagcgcaacaaacagggtgctgagtggatgtccccacac
caggagaacaagcagggcaagaagaagaagcgcaggaagcgcaaagcacccaagagttcg
ctgcttaactttgtcaccatcgaggaggccaaggcagatggggtggcccgtgaacccatc
aatggcacggttagtagccttcctgcagagctggaggagcagagcatcggtcgcttcgag
tggggcacagcaccaccaagcagcaccttcaaaccacctgccagcccggacctggcaaag
cactacaagagtgcctccccacaggcggccttccacctcaaggctgacagcacaccggcc
tcggtaaagaagcaccatgccatccaggaactgcctctggacaacacgtttgtggggggc
tgcgacaccctctccaagcgctcttccactagctcagaccacttcagtgcctcagagtgc
agctcccagggcggcttcaaggccaagggccccctgcacagcagacaggatgctattgaa
atgatggagggactagttagaagggcagcaccatcacctacagaaacaacatccacagac
gcttag
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integrated database retrieval system
