Pleurodeles waltl (Iberian ribbed newt): 138250478
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Entry
138250478 CDS
T10800
Symbol
ZC3H13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwl03019
]
138250478 (ZC3H13)
Messenger RNA biogenesis [BR:
pwl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
138250478 (ZC3H13)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_DUS3L
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
138250478
NCBI-ProteinID:
XP_069061501
LinkDB
All DBs
Position
8:1161586428..1162119272
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AA seq
1842 aa
AA seq
DB search
MALAPPVGPRRDSVSPPLCRRRASLRSLSQSPCQATRMRSTESGGSCSRSLVRGGPSRCP
PWSSRSSGSRSYRGRKRRRSRVRSGFLFGPRALGGGFGLPVPGGAQSSVTARDSSRRGGV
RRWPLSRKLKGRKKTKMSKIRRKVTVENAKTISDSTSRRPSVFERLGPSTGMSTETHCRN
WQNTGVCGFGKTCRYIHGPSPRGKGFTGSYRRSPERPTGDLRERMKNKRQEIETEPPKRS
TEDPASPVRKESSRGRHREKDDIKITKERTPDSEEENADWETQRDDSDIGDVNYDYDHEL
SLELKRQKIQRELMKLEQENMEKREEIIINKEISPEVLRSKRTPSPSPRKSSKSPKRKLS
PKASSSKKEKKASIVSSPLSDHQRSSKGSQSKKKGPRTPSPPPPSLEEILVVKKHKEKHK
SKDRAEEKIKEGKEKLRDLEKHKDKKEKLRDHSEGSRRQKRSPSPADHSGSNSSHSREYS
PPSARRRPVSPVPAKSTVQKHSFSQSRSRSVSPSGPHHSPVSSRHQSPSSQSGSSEQHHS
VSPRRKRTPSPSYQRAASPLARCSASPYSARTSTSPHKKLRSPSKNRSPVREKARADRER
TTVSRERRHERRDDTRGEKKKERDIRDERDDDLSQSTSKDQRDDRESRESRDLRDNRDGR
DRRDVKDSKETRDSRDARDYRDVRDSRDQRDARSTRDTSEYRDRESRESHRKEEPYDESR
SYARGHGREEPSRSESRNESRNERSGRSRGRVPDIQEKGNRGRSQADYHDNWESRSGYSE
RDRYDSREQARDASFDRRHGERDRRDNRERDQRPSSPVRHQGRNDDLDRDERREERRVDR
PDDRRDERTREREREKERDREREKERESERERVRERDRERDKERDRERDRERERERERER
EREEREREKEREKEREKEREKEREKEREKEREKEREKEREKEREKEREKEREKEREKERE
KEREKEREKEREREKEREREKEREKEREREREREREREREREKEREREKEREKIREREKE
RERQREWDEREKTKEDRREKREDIREERNPKDVHDERKSKKRHRNENSLSPRPSPKRRRD
QSPDSDAYNSGDEKNEKHRLLSQVVRPTECRSLSPPHLTEDRSTRWKEEKREPEKRDILK
RFEEQEIKERVCSAVERQKEHVVEAAEISKIKESESAVRIKTEEQDTSERLHEEIKKRSK
GQKKAMKKKKDEEVPLEKRSPELVTEEVVAFSPKKGQKKKSADRKRKRSRGDSDVSDEEV
TQHSKKKKGPRTPPVTAAIVVAPVPALVVGPAVNIIKEEPVEVVLEKAVVEIAQEKETNF
SDWSDDEVLERGEIIVPERIPEESITKPTQNKLEVTEPPPAVVEELPLRKPADQKRSSSI
CSNQSRASSRMRSPSNESAHRSGDDQTVRKKTIHGSSRDRERNRSMEKTGERKSRIDQLR
RGEPSRSTSSDRQDSRSHSSRRSSPESDRQGHSRSGSFDSRERVPERDRYDHDRERERDR
RDGRQRDWDRDTDKDWQRNRDRDRMRDRERDRRRDLDRDRDRDRERPPLELGDRDRERIT
DVPALMDLKPKVDRVDRDPEKVLVSRDPDHLEKDRTEVALEHMQDLNGSKKETLEVDNSK
LDDVQSLDSGGGGEYEPISDDELDEILADDAEKRDDQQDDEKTSDPLDVIDVDWSSLMPK
QPKEPREPGAALLKFTPGAVLLRVGISKRLAGPDLFTKVKETCQKSLEKPKDAESLFEHE
LGALNMAALQRKEQRAGLLSNLGPCCKALCSRRDFAIRKQLVKNEKGTMKHTYSNPPVVD
SDLLRLSLRLFKRKTTCSGPGPEKSEEGKPPLSSIKAELCVS
NT seq
5529 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgcgccccctgttggaccgcggagagatagcgtgtccccacccctttgtcgg
cggcgcgcgagtttgaggtcactgtcgcaaagtccatgccaggccacgcgcatgcgcagc
acagagagtggaggaagttgcagcaggagccttgtgagagggggaccctccaggtgtcct
ccttggagcagcaggagcagcggtagccgcagttatcgcggcagaaagaggaggaggagt
agggtccgatcaggattcctctttggtccgcgggcactgggaggaggcttcgggctccca
gtaccaggcggcgctcagtcatcggtcacggcccgggattcctcgcgcagaggcggcgtc
cgccgctggccgctttcgcgcaaactgaaggggcgaaagaaaacaaaaatgtctaaaata
aggcggaaagtcactgtggagaatgccaagaccatttcggatagcacttctcgcagaccc
agtgtgtttgaaaggcttggacccagtactgggatgagtacagagacacactgtcggaac
tggcagaacactggtgtctgcggttttggaaagacctgtagatacatacatggaccatca
ccaagaggcaaaggctttactggtagttaccgaaggtcaccagaaagacctactggagac
ctgcgggaaagaatgaagaacaaacgtcaggaaatcgaaacagagccaccaaaacgaagt
acggaagatccggcgtctccagtcaggaaagagtcatcgcggggcagacatcgtgaaaaa
gatgacatcaaaataactaaagagagaacaccagacagtgaagaagaaaatgctgactgg
gaaactcagcgagatgactctgacattggggatgtcaactatgattatgaccatgaattg
tcattggagctgaagcgtcagaagatccagagagaactaatgaagcttgaacaggagaat
atggagaagagggaggagattatcatcaataaggagatatctcctgaagttttaaggtca
aagagaacaccgtcaccttcaccaagaaaatctagcaagtctccaaaaaggaaactgagc
cctaaagcgtcctccagcaaaaaagagaagaaggcatctatagtctcttcaccactctct
gatcaccagagaagttctaaaggatcccaaagtaaaaagaaagggcctcgtactccaagc
ccacctcccccatctctggaagaaatacttgtggtaaaaaaacacaaagaaaaacataaa
tcaaaagaccgtgctgaagagaaaattaaagaaggaaaagaaaaactgcgtgatcttgaa
aaacacaaggataaaaaagaaaagctgagggaccattctgaaggctcccgccggcagaag
cgatcccccagtcctgccgatcattctggtagcaattcttctcattccagggaatactct
cccccttcagcacggagaagaccagtatccccagttccagccaagtcaacagtgcaaaag
cattctttctctcagtctcgcagtaggtcagtatcaccttcaggaccacatcattcgcct
gtatcctctcgtcaccagtcgccttcttcacagtctgggtcttctgagcaacaccattct
gtttcccctcgccgtaaaaggactccttcaccatcataccaaagagctgcgtccccgcta
gccagatgctcagcatctccatattctgctcgcacttctacctctccccataagaagctg
cgtagtccatcaaaaaatcgttcacctgtgagggaaaaagccagagccgatcgagagagg
actactgtttctcgcgagcgtcgccatgaaaggagggatgacacccgaggagaaaagaaa
aaagagagggatattagagatgaacgagatgatgacttgtcccaaagtacttcaaaggat
caaagagatgaccgagagtcaagggaaagccgagatctccgagataatcgagatggtcgt
gatcgtagggatgtgaaggattcaaaagagactcgagactccagagatgcacgtgattac
agagatgtcagagatagccgtgatcaaagagacgctcgttccacccgtgatactagtgag
tacagagatcgcgagagtcgagagtcccacagaaaggaagaaccttatgatgagagccga
agctatgcaaggggccatggcagagaggagccttcccgtagtgaatcgaggaatgaatca
aggaatgagcggtctggcaggagccgaggcagagttccagatatacaagagaaaggcaat
agaggaagaagtcaagcagactatcatgacaactgggaatcacgtagtggatattctgaa
agagaccgttacgacagtcgagagcaagcaagggatgcctcatttgatcgaagacatggc
gagagggatcgacgagacaacagagaacgagatcaaagaccaagctcgccagttcggcat
caaggaagaaatgatgaccttgatcgtgatgagcggcgtgaggagcgaagagtagacaga
cctgatgacagacgagatgagagaacaagggaacgagaacgagagaaagaacgcgataga
gaaagggaaaaggagcgtgaatctgagcgggagagagtccgcgaacgagaccgagagaga
gataaagaaagagatcgtgaaagagaccgtgaaagagagagagagcgggaaagggaacga
gaaagggaggagcgtgaaagagagaaggagcgggagaaggagcgggagaaggagcgggaa
aaggagcgggagaaggagcgcgaaaaggagcgggagaaggagcgcgaaaaggagcgggag
aaggagcgcgaaaaggagcgggagaaggagcgcgaaaaggagcgggagaaggagcgcgaa
aaggagcgtgagaaggagcgagagaaggagcgggaaagagagaaggagcgagagcgtgag
aaagagcgggaaaaagagagggagcgggaaagggagcgtgaaagggagagagagcgagaa
agagaaaaagaacgagagcgtgagaaggagagagaaaagataagagagagggaaaaggaa
agagaacgccaaagagaatgggatgagagagaaaagacaaaagaagatcgcagagagaag
agggaggatatacgtgaagaaagaaatcctaaagatgtccacgatgaacgtaaatcgaag
aaacgtcacaggaatgaaaacagcctaagtccacgcccgtcacccaaacggcgccgtgac
caatcacctgatagtgatgcctacaacagcggagatgagaaaaatgaaaagcacagactg
ttgagtcaagttgtccgacctacagaatgtcggtctctcagtccccctcatcttactgaa
gacagatctacgaggtggaaagaggaaaagagagaacctgagaaaagggatattttaaag
cgctttgaagaacaagagatcaaagaaagagtttgcagtgcagtagagaggcagaaagaa
catgtcgtggaagcagctgagatttctaagatcaaggaatcagaatctgcagttcgtatc
aagactgaggagcaggatacttctgagcgattgcatgaggaaattaaaaaaagatctaaa
ggacagaaaaaagcaatgaaaaagaaaaaggacgaagaagtgcccttagaaaagcgaagc
cctgagttggttacagaagaagtggtagccttttcacctaaaaaaggtcagaaaaagaaa
agtgctgataggaagcgtaaaaggtctagaggggattctgatgtttcagatgaggaagtg
acccagcacagtaagaagaagaaaggccctcggacaccaccggtgactgcagcaattgtt
gtggctccagtacctgctctggtagtcggaccagctgtaaacataataaaagaggagcca
gttgaagttgttcttgagaaagctgtagtggaaatagcccaagaaaaggaaacaaacttc
agtgattggtcagatgatgaggtccttgaacgtggagagattattgttccagaacgaata
cctgaagaatctattacgaagcccacccaaaataaactggaagtaacagagccaccacct
gctgttgttgaggagttgcctcttcggaagcctgctgatcagaaacgcagcagtagcatt
tgtagcaatcagagcagggcctcaagtcgcatgcgatcaccctcaaatgagtctgctcat
cgcagtggcgatgatcagactgtcagaaaaaagaccatacatggtagctccagggaccga
gaacgaaatagaagcatggaaaaaacaggggaacgcaagtccagaatagaccagctgaga
agaggggagccaagtcgtagcacgtcttcagatcgacaagattcgagaagccacagttca
agaagaagttctcctgagtctgaccgtcagggccattccagatctggatcctttgacagc
cgagagagagttccagaaagagatagatatgaccacgaccgggaaagagaacgtgacagg
agagatggacggcagagagattgggaccgtgatacagataaagactggcagagaaacagg
gatagagatcgaatgagagacagagaacgggaccgaagaagagatttggacagggatcga
gatagagatagagaacgacctcctcttgagcttggcgatcgagacagagagagaattaca
gatgtccctgctcttatggatctaaaacctaaagttgatagagttgatagagacccagag
aaggttttggtctcccgggatcctgatcatttagagaaagaccggacggaagtggcttta
gagcatatgcaggatttgaatggctcaaagaaagagaccttagaagtagataattctaag
ctggatgacgtgcagtcgttggattctggtggtggtggagagtatgagccaattagcgat
gatgaattggatgagattctggctgatgatgctgaaaagagagatgaccaacaggatgac
gagaaaacttcagatcctcttgatgtaattgatgttgactggtctagtctgatgccaaaa
caaccaaaagaacccagagaaccaggagctgcactcctaaagtttactccaggcgcagtt
ttgctgagagttggtatttcaaaacgactggcaggtcctgatcttttcacaaaagttaaa
gaaacctgtcagaaatcattggaaaagcctaaagatgcagaaagcttatttgaacatgag
ttgggagccctgaacatggctgcactacagaggaaagaacaaagagctggacttctcagc
aatctaggaccatgttgtaaagcactgtgctcgaggagggactttgcaattcgtaaacag
ttagtaaaaaatgagaagggtactatgaaacacacctactccaatcctcccgtggtggac
agtgacctgttaagactcagtctccggttattcaaacgaaagactacatgttctggacct
gggcctgaaaaatcagaggagggcaagcctccgctttcaagcataaaggcagagctttgt
gtttcttag
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integrated database retrieval system
